RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 MICALCLQ6ZW33 695 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 ZNF365Q70YC5 407 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 ZNF280BQ86YH2 543 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 ABI1Q8IZP0 508 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 FNIP1Q8TF40 1166 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 HEXIM2Q96MH2 286 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 MCEEQ96PE7 176 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 TACO1Q9BSH4 297 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 NT5C1AQ9BXI3 368 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 ELAC1Q9H777 363 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 HMGXB4Q9UGU5 601 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 ZBBXA8MT70 800 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 O00370 1275 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 FSBPO95073 299 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 FAM107AO95990 144 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 NDST1P52848 882 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 WDR5P61964 334 aaKnown RBP14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 NOMO2Q5JPE7 1267 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 TTC27Q6P3X3 843 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 CCDC105Q8IYK2 499 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 RCOR2Q8IZ40 523 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 ITFG2Q969R8 447 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 FAM129AQ9BZQ8 928 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 MIS12Q9H081 205 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.08
CSNK1E-201ENST00000359867 ABHD14A-ACY1A0A1B0GW23 586 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 F8W810 466 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 DDHD2O94830 711 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 ACTN3Q08043 901 aaPredicted RBP14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 GRIK3Q13003 919 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 LCLAT1Q6UWP7 414 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 C3orf58Q8NDZ4 430 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 RBM41Q96IZ5 413 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 SLC38A7Q9NVC3 462 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 CYTH4Q9UIA0 394 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 USTQ9Y2C2 406 aa14.52□□□□□ -0.09
CSNK1E-201ENST00000359867 SPTLC1O15269 473 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 GJB6O95452 261 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 KRT3P12035 628 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 GPD2P43304 727 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 COPS2P61201 443 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 RNASELQ05823 741 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 DHX9Q08211 1270 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 ZNF252P-AS1Q0IIN9 211 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 MTMR3Q13615 1198 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 SPDYCQ5MJ68 293 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 SYDE1Q6ZW31 735 aaPredicted RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 CCDC13Q8IYE1 715 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 HASPINQ8TF76 798 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 THOC1Q96FV9 657 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 CASD1Q96PB1 797 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 DDX56Q9NY93 547 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 CXXC1Q9P0U4 656 aaPredicted RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 DNAJB4Q9UDY4 337 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 TBKBP1A7MCY6 615 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 PIRO00625 290 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 CYP3A5P20815 502 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 RDXP35241 583 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 MAGOHP61326 146 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 PSMC1P62191 440 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 KLF1Q13351 362 aaPredicted RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 PPIGQ13427 754 aaKnown RBP eCLIP14.51□□□□□ -0.094e-7■■□□□ 13
CSNK1E-201ENST00000359867 KRT71Q3SY84 523 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 CYP4A22Q5TCH4 519 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 UNC93AQ86WB7 457 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 XYLT1Q86Y38 959 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 NPAS4Q8IUM7 802 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 MDM1Q8TC05 714 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 URGCPQ8TCY9 931 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 SLC12A6Q9UHW9 1150 aa14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 FNDC1Q4ZHG4 1894 aaPredicted RBP14.51□□□□□ -0.09
CSNK1E-201ENST00000359867 M0QYV0 167 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 AP1G2O75843 785 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 ECEL1O95672 775 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 PFKMP08237 780 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 PNPLA4P41247 253 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 ORC1Q13415 861 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 ACAP1Q15027 740 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 LRIG3Q6UXM1 1119 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 CCDC50Q8IVM0 306 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 GRK7Q8WTQ7 553 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 MCRS1Q96EZ8 462 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 CPXM1Q96SM3 734 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 OSBPL8Q9BZF1 889 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 SYNCQ9H7C4 482 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 ATP8A1Q9Y2Q0 1164 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 SNX9Q9Y5X1 595 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 PTPRSQ13332 1948 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 GMNCA6NCL1 334 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 SMIM23A6NLE4 172 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 CHUKO15111 745 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 INPPL1O15357 1258 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 FGBP02675 491 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 LRPAP1P30533 357 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 PTPN7P35236 360 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 PBX3P40426 434 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 OGDHQ02218 1023 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 TUSC3Q13454 348 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 TMEM240Q5SV17 173 aa14.5□□□□□ -0.09
CSNK1E-201ENST00000359867 EMC10Q5UCC4 262 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms