RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 GRK4P32298 578 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 CACNA2D1P54289 1103 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 NRLP54845 237 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 DUPD1Q68J44 220 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 CAPRIN2Q6IMN6 1127 aaKnown RBP13.24□□□□□ -0.29
GGPS1-202ENST00000358966 EMBQ6PCB8 327 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 TAB3Q8N5C8 712 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-202ENST00000358966 SENP8Q96LD8 212 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 ZIM3Q96PE6 472 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 NGRNQ9NPE2 291 aaKnown RBP13.24□□□□□ -0.29
GGPS1-202ENST00000358966 HESX1Q9UBX0 185 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 MTUS1Q9ULD2 1270 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 B3GAT3O94766 335 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 ETS1P14921 441 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 HOXD10P28358 340 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 CHRNA3P32297 505 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 NKX3-2P78367 333 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 KRT17Q04695 432 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 PPP1R7Q15435 360 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 UAP1Q16222 522 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-202ENST00000358966 SV2CQ496J9 727 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 MDH1BQ5I0G3 518 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 SCYL2Q6P3W7 929 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 OLFML1Q6UWY5 402 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 RTN4RL1Q86UN2 441 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-202ENST00000358966 FUKQ8N0W3 1084 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 RSRC1Q96IZ7 334 aaKnown RBP13.24□□□□□ -0.29
GGPS1-202ENST00000358966 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 YIPF3Q9GZM5 350 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-202ENST00000358966 SLC40A1Q9NP59 571 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
GGPS1-202ENST00000358966 TDRD15B5MCY1 1934 aaKnown RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 ZSCAN9O15535 394 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 ZSCAN5DPP0CG00 497 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 GABRB2P47870 512 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 NDUFV1P49821 464 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 PIGHQ14442 188 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 TIGD5Q53EQ6 642 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 ODF2Q5BJF6 829 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 ZDHHC24Q6UX98 284 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 UHMK1Q8TAS1 419 aaKnown RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 KHSRPQ92945 711 aaKnown RBP eCLIP13.23□□□□□ -0.292e-7■■□□□ 13.3
GGPS1-202ENST00000358966 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 RSAD1Q9HA92 442 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 DDX43Q9NXZ2 648 aaKnown RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 GRHL1Q9NZI5 618 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 DNPEPQ9ULA0 475 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 MYBPHLA2RUH7 354 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 BHMG1C9JSJ3 638 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 XPOTO43592 962 aaKnown RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 MAN1A1P33908 653 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 ZNF268Q14587 947 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-202ENST00000358966 MFSD4BQ5TF39 518 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 TRAF7Q6Q0C0 670 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 SPOCD1Q6ZMY3 1216 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 CCDC33Q8N5R6 958 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 FAM76AQ8TAV0 307 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 KCNK16Q96T55 309 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 CRTAC1Q9NQ79 661 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 PCYOX1Q9UHG3 505 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 ATP8A1Q9Y2Q0 1164 aa13.23□□□□□ -0.29
GGPS1-202ENST00000358966 SYNJ2BP-COX16A0A087WUM0 186 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 C2CD4BA6NLJ0 364 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 LRPAP1P30533 357 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CYP1B1Q16678 543 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 PAQR9Q6ZVX9 377 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 EPAS1Q99814 870 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CALN1Q9BXU9 219 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 ZDHHC18Q9NUE0 388 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 COX16Q9P0S2 106 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 ATXN2Q99700 1313 aaKnown RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 A0A0U1RQF3 1178 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 C3orf70A6NLC5 250 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 TP73O15350 636 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 TPD52L2O43399 206 aaKnown RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 TPP2P29144 1249 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CDKN2BP42772 138 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CD151P48509 253 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 BCAR1P56945 870 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 DHX9Q08211 1270 aaKnown RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 ADIGQ0VDE8 80 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 PTK7Q13308 1070 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CCDC14Q49A88 953 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 DSTYKQ6XUX3 929 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms