RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PTPRFP10586 1907 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CD58P19256 250 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 ZNF157P51786 506 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CHN2P52757 468 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 HSP90AA5PQ58FG0 334 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 WDR78Q5VTH9 848 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 PASD1Q8IV76 773 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 PDIK1LQ8N165 341 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CPT1BQ92523 772 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CATSPER2Q96P56 530 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 WDR91A4D1P6 747 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TLR3O15455 904 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 DENRO43583 198 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 NDUFB10O96000 172 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 ZSCAN5DPP0CG00 497 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 MYL4P12829 197 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 BGNP21810 368 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 GARTP22102 1010 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 CPOXP36551 454 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 RARRES1P49788 294 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 CREB5Q02930 508 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 USH1GQ495M9 461 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PLA2G4FQ68DD2 849 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 MFSD7Q6UXD7 560 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 SV2AQ7L0J3 742 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 ARCQ7LC44 396 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TTC7BQ86TV6 843 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TREML1Q86YW5 311 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 SIAH1Q8IUQ4 282 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 MARVELD2Q8N4S9 558 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 SPIRE2Q8WWL2 714 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 C12orf42Q96LP6 360 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PLEKHG4BQ96PX9 1271 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 DHX33Q9H6R0 707 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 DNAAF2Q9NVR5 837 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 GALNT8Q9NY28 637 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PPM1HQ9ULR3 514 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TMEM191CA6NGB0 347 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TISP43B9A030 160 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 KLHL2O95198 593 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TMEM191BP0C7N4 346 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 FAM200BP0CF97 657 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 DESP17661 470 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 HOXA13P31271 388 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 CDKN2BP42772 138 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 GTF2A2P52657 109 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 ZNF200P98182 395 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PTK7Q13308 1070 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PIGHQ14442 188 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 HIC1Q14526 733 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TAZQ16635 292 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TTC39BQ5VTQ0 682 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 B3GNT6Q6ZMB0 384 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 FBXO36Q8NEA4 188 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 CPA5Q8WXQ8 436 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PRICKLE1Q96MT3 831 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-205ENST00000357568 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 PADI4Q9UM07 663 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 TBX20Q9UMR3 447 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 IKBKGQ9Y6K9 419 aa11.09□□□□□ -0.63
CAPN3-205ENST00000357568 A0A088AWK7 358 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 A0A0G2JLL6 359 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 FAM170AA1A519 330 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 MANSC4A6NHS7 340 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 FAM155AB1AL88 458 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 FAM189A1O60320 539 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 SNNO75324 88 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 LSM8O95777 96 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 CALB1P05937 261 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 ENO1P06733 434 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 VCLP18206 1134 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 SSTR1P30872 391 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 SNAPC2Q13487 334 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 EFTUD2Q15029 972 aaKnown RBP eCLIP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 ADRM1Q16186 407 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 TEX44Q53QW1 395 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 STXBP5Q5T5C0 1151 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 LGSNQ5TDP6 509 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 UGT2A3Q6UWM9 527 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 PRRT2Q7Z6L0 340 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 KCNN1Q92952 543 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 FAM111AQ96PZ2 611 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 WDR83Q9BRX9 315 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 THTPAQ9BU02 230 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 Q9H521 79 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 PPARGC1AQ9UBK2 798 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 FAM237BA0A1B0GVD1 139 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms