RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 KPNA1P52294 538 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ITGA9Q13797 1035 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 DMC1Q14565 340 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 MEA1Q16626 185 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 SV2AQ7L0J3 742 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 SYTL2Q9HCH5 934 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 PXMP2Q9NR77 195 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 SELENONQ9NZV5 590 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 EIF3LQ9Y262 564 aaKnown RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 PRRG1O14668 218 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ZSCAN9O15535 394 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 VPS26AO75436 327 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 RUNX1T1Q06455 604 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 CYLC2Q14093 348 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 HIST2H2ACQ16777 129 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 HIST2H2AA3Q6FI13 130 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 NUP93Q8N1F7 819 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 RMDN2Q96LZ7 410 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 CINPQ9BW66 212 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 MTMR12Q9C0I1 747 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ASB7Q9H672 318 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 RAD54BQ9Y620 910 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 AP1G2O75843 785 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 CTSHP09668 335 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 ANXA11P50995 505 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 VCPP55072 806 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 TWF1Q12792 350 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 TMEM154Q6P9G4 183 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 KDELC2Q7Z4H8 507 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 TAS1R2Q8TE23 839 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 TMEM176AQ96HP8 235 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 HEY2Q9UBP5 337 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 DMGDHQ9UI17 866 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 PSMA4P25789 261 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 RHBDL3P58872 404 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 PSMC6P62333 389 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 RPL10AP62906 217 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 SREBF2Q12772 1141 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 PCSK7Q16549 785 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 MDH1BQ5I0G3 518 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 CACHD1Q5VU97 1274 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 FAM162AQ96A26 154 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 SEPT5Q99719 369 aaPredicted RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 KIAA1683Q9H0B3 1180 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 CISHQ9NSE2 258 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 DAB1O75553 588 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 TRPC1P48995 793 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 DEFA1P59665 94 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 DEFA3P59666 94 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 NAB1Q13506 487 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 NFE2Q16621 373 aaPredicted RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 C10orf120Q5SQS8 335 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 FOXR2Q6PJQ5 311 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 ADCK1Q86TW2 530 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 PLD3Q8IV08 490 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 ATXN2LQ8WWM7 1075 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 WNK4Q96J92 1243 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 WNT7AO00755 349 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 ASMTLO95671 621 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 ALBP02768 609 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 CHRM3P20309 590 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 HNRNPH1P31943 449 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 MGAT5Q09328 741 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 SEZ6Q53EL9 994 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 GNASQ5JWF2 1037 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 DACT2Q5SW24 774 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 FKBP1CQ5VVH2 108 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 RNF180Q86T96 592 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 DNAAF5Q86Y56 855 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 MDM1Q8TC05 714 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 EPS8L3Q8TE67 593 aaKnown RBP12.14□□□□□ -0.47
COL9A1-202ENST00000357250 FAM172AQ8WUF8 416 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 SH3GL1Q99961 368 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 TRPC7Q9HCX4 862 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 GIMAP4Q9NUV9 329 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 CRLS1Q9UJA2 301 aa12.14□□□□□ -0.47
COL9A1-202ENST00000357250 SRRM3A6NNA2 597 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-202ENST00000357250 FKBP9O95302 570 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 HOXB8P17481 243 aaPredicted RBP12.13□□□□□ -0.47
COL9A1-202ENST00000357250 FKBP9P1Q75LS8 142 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 P3H2Q8IVL5 708 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 MCOLN2Q8IZK6 566 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 SLC25A41Q8N5S1 370 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 TERB1Q8NA31 727 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 KIAA0895Q8NCT3 520 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 CCT7Q99832 543 aa12.13□□□□□ -0.47
COL9A1-202ENST00000357250 FAM118BQ9BPY3 351 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms