RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CRABP2P29373 138 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 GRIK1P39086 918 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 EFTUD2Q15029 972 aaKnown RBP eCLIP6.81□□□□□ -1.325e-8■■■□□ 16
TRIM38-201ENST00000357085 NXNQ6DKJ4 435 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 PEX5LQ8IYB4 626 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 GALNT4Q8N4A0 578 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 RMDN3Q96TC7 470 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 ALG13Q9NP73 1137 aaKnown RBP6.81□□□□□ -1.32
TRIM38-201ENST00000357085 H0YC42 278 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 NOP56O00567 594 aaKnown RBP6.81□□□□□ -1.32
TRIM38-201ENST00000357085 PRIM2P49643 509 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 PRELPP51888 382 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 CDC16Q13042 620 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 RPS6KA2Q15349 733 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 MTX3Q5HYI7 312 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 MDH1BQ5I0G3 518 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 NLRX1Q86UT6 975 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 KIAA0895Q8NCT3 520 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 TMC2Q8TDI7 906 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 PDCD6IPQ8WUM4 868 aaKnown RBP6.81□□□□□ -1.32
TRIM38-201ENST00000357085 DUSP9Q99956 384 aaKnown RBP6.81□□□□□ -1.32
TRIM38-201ENST00000357085 CHKBQ9Y259 395 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 RPA1P27694 616 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 ALDH1A3P47895 512 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 PPP2R5DQ14738 602 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 DARS2Q6PI48 645 aaKnown RBP6.81□□□□□ -1.32
TRIM38-201ENST00000357085 ZNF571Q7Z3V5 609 aaPredicted RBP6.81□□□□□ -1.32
TRIM38-201ENST00000357085 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 DDX28Q9NUL7 540 aaKnown RBP6.81□□□□□ -1.32
TRIM38-201ENST00000357085 DAPK2Q9UIK4 370 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 SESN1Q9Y6P5 492 aa6.81□□□□□ -1.32
TRIM38-201ENST00000357085 CCDC78A2IDD5 438 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 STX7O15400 261 aaKnown RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 TNNC2P02585 160 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 TGM2P21980 687 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SOX6P35712 828 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 VAMP7P51809 220 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PLS1Q14651 629 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PDIA6Q15084 440 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SLC25A41Q8N5S1 370 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PYDC1Q8WXC3 89 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 ASB2Q96Q27 587 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 CADM1Q9BY67 442 aaKnown RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 CEP44Q9C0F1 390 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PRELID1Q9Y255 219 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 ANGPT2O15123 496 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SRP72O76094 671 aaKnown RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PDGFRBP09619 1106 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 CYP2C9P11712 490 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 TUBP50607 506 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 MAP3K7CLP57077 242 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 ZNF846Q147U1 533 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 STON2Q8WXE9 905 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 DENRO43583 198 aaKnown RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PSMA2P25787 234 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 TAB1Q15750 504 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 DGUOKQ16854 277 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 TIMM50Q3ZCQ8 353 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SYCE2Q6PIF2 218 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PUS3Q9BZE2 481 aaKnown RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PAIP1Q9H074 479 aaKnown RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 ZNHIT2Q9UHR6 403 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 VPS9D1Q9Y2B5 631 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 CAB39Q9Y376 341 aaPredicted RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 INSCQ1MX18 579 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 C6orf10Q5SRN2 563 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 KRT73Q86Y46 540 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 TNFRSF25Q93038 417 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 RNF103-CHMP3A0A140T963 221 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 MYMKA6NI61 221 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 PSMD3O43242 534 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 RALBP11234 206 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 EPHA7Q15375 998 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SLC35C1Q96A29 364 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 RNF25Q96BH1 459 aaPredicted RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SRPK1Q96SB4 655 aaKnown RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SLC25A23Q9BV35 468 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 ILKAPQ9H0C8 392 aaPredicted RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 EBF3Q9H4W6 596 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 A0A0J9YVX5 310 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SPRP35270 261 aaPredicted RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 HOXD12P35452 270 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 OXCT1P55809 520 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 MSLNQ13421 630 aaPredicted RBP6.8□□□□□ -1.32
TRIM38-201ENST00000357085 BDH2Q9BUT1 245 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 ZNF510Q9Y2H8 683 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 RPTORQ8N122 1335 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 BBIP1A8MTZ0 92 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 CHRNDQ07001 517 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 MROH9Q5TGP6 573 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 CASC4Q6P4E1 433 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 RFWD3Q6PCD5 774 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 JDP2Q8WYK2 163 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 CGREF1Q99674 301 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 DCUN1D5Q9BTE7 237 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 APOL6Q9BWW8 343 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 SLC9A2Q9UBY0 812 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 VCLP18206 1134 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 NR2C2P49116 596 aa6.8□□□□□ -1.32
TRIM38-201ENST00000357085 ARMCX4Q5H9R4 360 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms