RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 FLT3P36888 993 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 PLA2G4AP47712 749 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 TKTL1P51854 596 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 GALCP54803 685 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CENPCQ03188 943 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ZNF252P-AS1Q0IIN9 211 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 TAF10Q12962 218 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 SLC18A3Q16572 532 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 PTPROQ16827 1216 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 TPGS2Q68CL5 300 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 TXNDC8Q6A555 127 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ALKBH5Q6P6C2 394 aaKnown RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 OLFML1Q6UWY5 402 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 FAM183BPQ6ZVS7 135 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 XYLT1Q86Y38 959 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CNGA4Q8IV77 575 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 GPR65Q8IYL9 337 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 DCP1BQ8IZD4 617 aaKnown RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 ARFGAP1Q8N6T3 406 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ADAM32Q8TC27 787 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 SMARCD1Q96GM5 515 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 PPP1R13BQ96KQ4 1090 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 EMILIN2Q9BXX0 1053 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ISCUQ9H1K1 167 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 LHX5Q9H2C1 402 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CCSER2Q9H7U1 834 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.24□□□□□ -1.73
LIG4-201ENST00000356922 IL37Q9NZH6 218 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 EPN1Q9Y6I3 576 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 DOCK8Q8NF50 2099 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 A0A1W2PRU2 124 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ARHGEF37A1IGU5 675 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 XPO1O14980 1071 aaKnown RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 FANCGO15287 622 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 NDUFA10O95299 355 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 F11P03951 625 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 TNFAIP3P21580 790 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 PAX3P23760 479 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 RFC1P35251 1148 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 RNASE9P60153 205 aaKnown RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 CYP4F8P98187 520 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 BST2Q10589 180 aaKnown RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 NFE2Q16621 373 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 RARS2Q5T160 578 aaKnown RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 FAM182AQ5T1J6 154 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 OTUD1Q5VV17 481 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 PM20D1Q6GTS8 502 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ACAD10Q6JQN1 1059 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 DENND5BQ6ZUT9 1274 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 MCOLN2Q8IZK6 566 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 EFHBQ8N7U6 833 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ZNF397Q8NF99 534 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 SPATA18Q8TC71 538 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 SPPL2BQ8TCT7 592 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ING5Q8WYH8 240 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 FUBP3Q96I24 572 aaKnown RBP eCLIP4.24□□□□□ -1.73
LIG4-201ENST00000356922 C8orf48Q96LL4 319 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CORO1BQ9BR76 489 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 RPP25Q9BUL9 199 aaKnown RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 DMAP1Q9NPF5 467 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 GMIPQ9P107 970 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 KIAA1257Q9ULG3 409 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 NAALADL1Q9UQQ1 740 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CCL26Q9Y258 94 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 HYOU1Q9Y4L1 999 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 CFAP54Q96N23 3096 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ANAPC1Q9H1A4 1944 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 A0A1W2PQH9 124 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 FAM92AA1XBS5 289 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 GRXCR2A6NFK2 248 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 GOLGA8SH3BPF8 625 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 LCA5LO95447 670 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 KCNA5P22460 613 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 MAGEA11P43364 429 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 GABRB2P47870 512 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CDK17Q00537 523 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 KCTD19Q17RG1 926 aaPredicted RBP4.24□□□□□ -1.73
LIG4-201ENST00000356922 PPP1R15BQ5SWA1 713 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CCDC122Q5T0U0 273 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ARTNQ5T4W7 220 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 TMEM184AQ6ZMB5 413 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 C4orf50Q6ZRC1 276 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 NUP93Q8N1F7 819 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 PLCD3Q8N3E9 789 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 PSMG2Q969U7 264 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 RSPRY1Q96DX4 576 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 CCDC42Q96M95 316 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 SLC46A2Q9BY10 475 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 DNAI2Q9GZS0 605 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 GKN1Q9NS71 199 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 TMEM59LQ9UK28 342 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 ADGRG1Q9Y653 693 aa4.24□□□□□ -1.73
LIG4-201ENST00000356922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.24□□□□□ -1.73
LIG4-201ENST00000356922 F5P12259 2224 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ZNF840PA6NDX5 716 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 RHOP08100 348 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 FOSL2P15408 326 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 BCAT1P54687 386 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 DAOAP59103 153 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms