RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SERPINB4P48594 390 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 LY6KQ17RY6 165 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 FAM110CQ1W6H9 321 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 RASGEF1CQ8N431 466 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 AGAP11Q8TF27 550 aa12.8□□□□□ -0.36
COLCA1-201ENST00000355430 MAPTP10636 758 aaKnown RBP12.79□□□□□ -0.36
COLCA1-201ENST00000355430 BGNP21810 368 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 PTPN4P29074 926 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SPRYD7Q5W111 196 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 TRIM67Q6ZTA4 783 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 TRPV2Q9Y5S1 764 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SMAPO00193 183 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 DNALI1O14645 258 aaPredicted RBP12.79□□□□□ -0.36
COLCA1-201ENST00000355430 DDX3YO15523 660 aaKnown RBP12.79□□□□□ -0.36
COLCA1-201ENST00000355430 B3GAT3O94766 335 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 GPD1P21695 349 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 GARTP22102 1010 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SERPINB9P50453 376 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 PLD1Q13393 1074 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 MED21Q13503 144 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 HYIQ5T013 277 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 CKAP2Q8WWK9 683 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ALG3Q92685 438 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ART4Q93070 314 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 UPF3AQ9H1J1 476 aaKnown RBP12.79□□□□□ -0.36
COLCA1-201ENST00000355430 IPPQ9Y573 584 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SLIT2O94813 1529 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ANKRD63C9JTQ0 380 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ATP9BO43861 1147 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 PECAM1P16284 738 aaPredicted RBP12.79□□□□□ -0.36
COLCA1-201ENST00000355430 EPHB2P29323 1055 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 FLT3LGP49771 235 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 OCRLQ01968 901 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 PID1Q7Z2X4 250 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SLC24A2Q9UI40 661 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
COLCA1-201ENST00000355430 VTNP04004 478 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ADCYAP1R1P41586 468 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 RPL10AP62906 217 aaKnown RBP12.79□□□□□ -0.36
COLCA1-201ENST00000355430 ZNF280DQ6N043 979 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 CERS5Q8N5B7 392 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 TEKT4Q8WW24 435 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 KAT2BQ92831 832 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SIK2Q9H0K1 926 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 FAM8A1Q9UBU6 413 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 CBX6O95503 412 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 THP07101 528 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 PAMP19021 973 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 EPHB3P54753 998 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 KLC3Q6P597 504 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 C4orf19Q8IY42 314 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 CD99L2Q8TCZ2 262 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SDCCAG3Q96C92 435 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 PWWP2AQ96N64 755 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 EPAS1Q99814 870 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 SHCBP1LQ9BZQ2 653 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 BFARQ9NZS9 450 aa12.79□□□□□ -0.36
COLCA1-201ENST00000355430 TGFB1I1O43294 461 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 CYP3A4P08684 503 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 DEUP1Q05D60 604 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 RARS2Q5T160 578 aaKnown RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 CDR2LQ86X02 465 aaPredicted RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ABRAQ8N0Z2 381 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 AGAP3Q96P47 875 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 NT5C1AQ9BXI3 368 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 FSD1LQ9BXM9 530 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 DNPEPQ9ULA0 475 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 USP20Q9Y2K6 914 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 GNRH1P01148 92 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 PYGBP11216 843 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 INSRRP14616 1297 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 TAC1P20366 129 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ACADSBP45954 432 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 hCG_2014768A0A024R1R8 64 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 CYP1A2P05177 515 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ACADSP16219 412 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 RFC1P35251 1148 aaPredicted RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 POU5F1BQ06416 359 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 FSTL1Q12841 308 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 SLC12A1Q13621 1099 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ZNF235Q14590 738 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 MTFR1Q15390 333 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 TRIP10Q15642 601 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 EXOC3L1Q86VI1 746 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ZNF384Q8TF68 577 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 DNAJB3Q8WWF6 145 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 GRIN2DO15399 1336 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms