RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 BANPQ8N9N5 519 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 FNIP1Q8TF40 1166 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 RSRC1Q96IZ7 334 aaKnown RBP20.41■□□□□ 0.86
COL13A1-201ENST00000354547 RSAD1Q9HA92 442 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 TSPAN16Q9UKR8 245 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 CFAP69A5D8W1 941 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 CYP3A5P20815 502 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 RGS17Q9UGC6 210 aaPredicted RBP20.4■□□□□ 0.86
COL13A1-201ENST00000354547 EFR3BQ9Y2G0 817 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 TROVE2P10155 538 aaKnown RBP eCLIP20.4■□□□□ 0.86
COL13A1-201ENST00000354547 INSRRP14616 1297 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 BGNP21810 368 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 ZNF200P98182 395 aaPredicted RBP20.4■□□□□ 0.86
COL13A1-201ENST00000354547 PPP1R13LQ8WUF5 828 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 MCRS1Q96EZ8 462 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 LPIN3Q9BQK8 851 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 MAGEB5Q9BZ81 275 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 MIS12Q9H081 205 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 IFT122Q9HBG6 1241 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 TNFSF13BQ9Y275 285 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 A0A1B0GUA9 196 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 IL18RAPO95256 599 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 HMGCRP04035 888 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 APRTP07741 180 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 KCTD2Q14681 263 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 SMAD1Q15797 465 aaKnown RBP20.4■□□□□ 0.86
COL13A1-201ENST00000354547 SLC10A6Q3KNW5 377 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 NOL9Q5SY16 702 aaKnown RBP20.4■□□□□ 0.86
COL13A1-201ENST00000354547 SCUBE3Q8IX30 993 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 MZB1Q8WU39 189 aa20.4■□□□□ 0.86
COL13A1-201ENST00000354547 SLC7A6OSQ96CW6 309 aaPredicted RBP20.4■□□□□ 0.86
COL13A1-201ENST00000354547 RBL1P28749 1068 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 ZNF143P52747 638 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-201ENST00000354547 ZBTB16Q05516 673 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 TLDC1Q6P9B6 456 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 RGS9BPQ6ZS82 235 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 PRR11Q96HE9 360 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-201ENST00000354547 FGD4Q96M96 766 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 CXCL16Q9H2A7 254 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 LRMDAQ9H2I8 198 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 SMARCAD1Q9H4L7 1026 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 FBXO6Q9NRD1 293 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-201ENST00000354547 HEY2Q9UBP5 337 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 NR2E3Q9Y5X4 410 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 NDC80O14777 642 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 SKIV2L2P42285 1042 aaKnown RBP20.39■□□□□ 0.85
COL13A1-201ENST00000354547 SLC18A1P54219 525 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 TTLL12Q14166 644 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-201ENST00000354547 CA9Q16790 459 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 PLPPR4Q7Z2D5 763 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 AGGF1Q8N302 714 aaeCLIP20.39■□□□□ 0.85
COL13A1-201ENST00000354547 TSSK1BQ9BXA7 367 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 SLC13A1Q9BZW2 595 aa20.39■□□□□ 0.85
COL13A1-201ENST00000354547 E7ESA3 106 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 BMPR2Q13873 1038 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 TAZQ16635 292 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 FAM13CQ8NE31 585 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 CCDC110Q8TBZ0 833 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 CNPY3Q9BT09 278 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 B3GNT5Q9BYG0 378 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 GAS2O43903 313 aaKnown RBP20.38■□□□□ 0.85
COL13A1-201ENST00000354547 LGR5O75473 907 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 ARF4P18085 180 aaPredicted RBP20.38■□□□□ 0.85
COL13A1-201ENST00000354547 TMEM132DQ14C87 1099 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 NOMO1Q15155 1222 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 AMHR2Q16671 573 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 ACOT1Q86TX2 421 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 MMP19Q99542 508 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 MECRQ9BV79 373 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 KANSL3Q9P2N6 904 aa20.38■□□□□ 0.85
COL13A1-201ENST00000354547 IQANK1A0A1B0GTG1 560 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 TRIM49D1C9J1S8 452 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 UGT1A9O60656 530 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ENTPD5O75356 428 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ZNF286BP0CG31 522 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 GM2AP17900 193 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 BCAR1P56945 870 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 TTC8Q8TAM2 541 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 NLRP7Q8WX94 980 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 DHRS4Q9BTZ2 278 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 UGT1A7Q9HAW7 530 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 UGT1A10Q9HAW8 530 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 UGT1A8Q9HAW9 530 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 MAD1L1Q9Y6D9 718 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 CENPFP49454 3210 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 CCDC195A0A1B0GUA6 201 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 C2CD4BA6NLJ0 364 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 CXorf49A8MYA2 514 aaPredicted RBP20.37■□□□□ 0.85
COL13A1-201ENST00000354547 HBP1O60381 514 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 CNMDO75829 334 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 VDRP11473 427 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 PHKA2P46019 1235 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 GOLGA7BQ2TAP0 167 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 CYP4V2Q6ZWL3 525 aaPredicted RBP20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ILDR2Q71H61 639 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 CLNKQ7Z7G1 428 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ZNF276Q8N554 614 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 NETO2Q8NC67 525 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 ZNF570Q96NI8 536 aa20.37■□□□□ 0.85
COL13A1-201ENST00000354547 RNF157Q96PX1 679 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms