RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 GABRG2P18507 467 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 POLR2BP30876 1174 aaKnown RBP11.96□□□□□ -0.49
RTN3-204ENST00000354497 GRIA2P42262 883 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 KIR2DL1P43626 348 aaPredicted RBP11.96□□□□□ -0.49
RTN3-204ENST00000354497 SLC14A1Q13336 389 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 IL17AQ16552 155 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 SLC39A4Q6P5W5 647 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 TOGARAM2Q6ZUX3 1019 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 MARCH9Q86YJ5 346 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 SLC41A1Q8IVJ1 513 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 ZNF513Q8N8E2 541 aaPredicted RBP11.96□□□□□ -0.49
RTN3-204ENST00000354497 NAT16Q8N8M0 369 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 ACBD6Q9BR61 282 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 CCSER1Q9C0I3 900 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 CFAP97Q9P2B7 532 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 AGAP1Q9UPQ3 857 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 TCHHQ07283 1943 aa11.96□□□□□ -0.5
RTN3-204ENST00000354497 ANKRD63C9JTQ0 380 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 SLC9A3R1O14745 358 aaPredicted RBP11.95□□□□□ -0.5
RTN3-204ENST00000354497 SLFN14P0C7P3 912 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 HOXB2P14652 356 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 ANXA13P27216 316 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 PNPLA4P41247 253 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 TNFRSF4P43489 277 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 SLC12A3P55017 1021 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 ZXDBP98169 803 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 TFAMQ00059 246 aaKnown RBP11.95□□□□□ -0.5
RTN3-204ENST00000354497 C10orf76Q5T2E6 689 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 BTBD8Q5XKL5 378 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 ZNF771Q7L3S4 317 aaPredicted RBP11.95□□□□□ -0.5
RTN3-204ENST00000354497 TRMT11Q7Z4G4 463 aaKnown RBP11.95□□□□□ -0.5
RTN3-204ENST00000354497 SLCO6A1Q86UG4 719 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 OSTM1Q86WC4 334 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 GPBP1Q86WP2 473 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 CCDC83Q8IWF9 413 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 ADGRG2Q8IZP9 1017 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 PLCD4Q9BRC7 762 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
RTN3-204ENST00000354497 KCND2Q9NZV8 630 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 AGO2Q9UKV8 859 aaKnown RBP11.95□□□□□ -0.5
RTN3-204ENST00000354497 FREM2Q5SZK8 3169 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 PCDH15Q96QU1 1955 aa11.95□□□□□ -0.5
RTN3-204ENST00000354497 IGHV1OR15-9A0A0B4J2B8 117 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 A0A1W2PQD8 194 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 KIF1CO43896 1103 aaKnown RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 ITGB3P05106 788 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 KRT19P08727 400 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 MBL2P11226 248 aaPredicted RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 GNSP15586 552 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 MAOBP27338 520 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 GRIK1P39086 918 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 EIF2DP41214 584 aaKnown RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 PSMC1P62191 440 aaKnown RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 CBX1P83916 185 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 CYP4F3Q08477 520 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 ST3GAL1Q11201 340 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 IFRD2Q12894 506 aaPredicted RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 GRIK2Q13002 908 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 CCDC157Q569K6 752 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 SYCP2LQ5T4T6 812 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 RHBDF2Q6PJF5 856 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 GAS2L3Q86XJ1 694 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 EGFL6Q8IUX8 553 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 FAM184AQ8NB25 1140 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 NOC3LQ8WTT2 800 aaKnown RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 MYLPFQ96A32 169 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 FAM124BQ9H5Z6 455 aaPredicted RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 SUSD2Q9UGT4 822 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 ODF2LQ9ULJ1 636 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 PTPRDP23468 1912 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 CACNA1EQ15878 2313 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 SCN1AP35498 2009 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 MEI4A8MW99 385 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 LAD1O00515 517 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 ZNF217O75362 1048 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 PLCG1P19174 1290 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 PCSK1P29120 753 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 USP46P62068 366 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 FOXK1P85037 733 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 CYP27A1Q02318 531 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 GAD2Q05329 585 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 ARSHQ5FYA8 562 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 WDR45BQ5MNZ6 344 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 LY6G5CQ5SRR4 150 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 SDE2Q6IQ49 451 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 KIAA1324Q6UXG2 1013 aaKnown RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 TMEM86AQ8N2M4 240 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 PIP4K2CQ8TBX8 421 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 UBL7Q96S82 380 aaPredicted RBP11.94□□□□□ -0.5
RTN3-204ENST00000354497 PKMYT1Q99640 499 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 RNF38Q9H0F5 515 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 MIR1-1HGQ9H1L0 117 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 PRDM16Q9HAZ2 1276 aa11.94□□□□□ -0.5
RTN3-204ENST00000354497 PARVGQ9HBI0 331 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms