RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 LRRD1A4D1F6 860 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 TRUB2O95900 331 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 ALDH7A1P49419 539 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 CACNA2D1P54289 1103 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 ATP11AP98196 1134 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 SLC7A5Q01650 507 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 DHX34Q14147 1143 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 MRPL58Q14197 206 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 CYP1B1Q16678 543 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 MAP9Q49MG5 647 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 CTXN3Q4LDR2 81 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 ATP13A4Q4VNC1 1196 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 SLC39A12Q504Y0 691 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 SPOCD1Q6ZMY3 1216 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 IFT20Q8IY31 132 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 HDAC7Q8WUI4 952 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 MAGOHBQ96A72 148 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 FUBP3Q96I24 572 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTN-201ENST00000348225 DDX23Q9BUQ8 820 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 OXCT2Q9BYC2 517 aaPredicted RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 GPR62Q9BZJ7 368 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 ULBP1Q9BZM6 244 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 HOMER3Q9NSC5 361 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 HCSTQ9UBK5 93 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 PCSK1NQ9UHG2 260 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 DMGDHQ9UI17 866 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 NR2E1Q9Y466 385 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 HHLA1C9JL84 531 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 PI4K2BG5E9Z4 385 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 H7C4K7 107 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 BAIAP3O94812 1187 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 RARAP10276 462 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 ITGB8P26012 769 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 IL1R2P27930 398 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 MATKP42679 507 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 CDR1P51861 262 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 YWHAZP63104 245 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 RBM10P98175 930 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 TXNRD3NBQ6F5E7 133 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 C12orf50Q8NA57 414 aaPredicted RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 HNRNPLLQ8WVV9 542 aaKnown RBP19.54■□□□□ 0.72
PTN-201ENST00000348225 RHOBTB2Q9BYZ6 727 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 ARFGAP3Q9NP61 516 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 TMEM30AQ9NV96 361 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 AMACRQ9UHK6 382 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 PATJQ8NI35 1801 aa19.54■□□□□ 0.72
PTN-201ENST00000348225 TCRBV7S2A1N4TA0A589 114 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 TJP3O95049 919 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 FNTAP49354 379 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 NDUFV1P49821 464 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 DAOAP59103 153 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 MRPS25P82663 173 aaKnown RBP19.53■□□□□ 0.72
PTN-201ENST00000348225 KLF1Q13351 362 aaPredicted RBP19.53■□□□□ 0.72
PTN-201ENST00000348225 SIX1Q15475 284 aaPredicted RBP19.53■□□□□ 0.72
PTN-201ENST00000348225 SMTNL2Q2TAL5 461 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 TFDP3Q5H9I0 405 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 MFSD7Q6UXD7 560 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 IRGQQ8WZA9 623 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 RAPGEF5Q92565 580 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 TBCBQ99426 244 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 POPDC2Q9HBU9 364 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 STAP1Q9ULZ2 295 aa19.53■□□□□ 0.72
PTN-201ENST00000348225 CARNS1A5YM72 827 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 FAM187AA6NFU0 413 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 NT5C1B-RDH14C9J2C7 533 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 ZBED1O96006 694 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 TNFRSF8P28908 595 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 NOS2P35228 1153 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 WDR5P61964 334 aaKnown RBP19.52■□□□□ 0.72
PTN-201ENST00000348225 DR1Q01658 176 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 GUCY2DQ02846 1103 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 BOLA3Q53S33 107 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 KCNT1Q5JUK3 1230 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 SH3PXD2AQ5TCZ1 1133 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 ANKS3Q6ZW76 656 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 STRADAQ7RTN6 431 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 GPRIN1Q7Z2K8 1008 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 MTERF4Q7Z6M4 381 aaKnown RBP19.52■□□□□ 0.72
PTN-201ENST00000348225 ZDHHC14Q8IZN3 488 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 DEFB106AQ8N104 65 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 SCML4Q8N228 414 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 TEKT4Q8WW24 435 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 CENPIQ92674 756 aaPredicted RBP19.52■□□□□ 0.72
PTN-201ENST00000348225 ACSF2Q96CM8 615 aaPredicted RBP19.52■□□□□ 0.72
PTN-201ENST00000348225 SLC2A13Q96QE2 648 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 C11orf84Q9BUA3 381 aaPredicted RBP19.52■□□□□ 0.72
PTN-201ENST00000348225 HEMGNQ9BXL5 484 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 CWH43Q9H720 699 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 LRRC19Q9H756 370 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 PCYOX1Q9UHG3 505 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 RASAL2Q9UJF2 1139 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 EFR3BQ9Y2G0 817 aa19.52■□□□□ 0.72
PTN-201ENST00000348225 hCG_1818297A0A087WSY0 165 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 ZMYND10O75800 440 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 OR4Q2P0C623 313 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 KDELR1P24390 212 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 GRIK1P39086 918 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 PBX3P40426 434 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 CDKN2BP42772 138 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 LLGL1Q15334 1064 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms