RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 RAPGEF5Q92565 580 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 VWCEQ96DN2 955 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 KCNK16Q96T55 309 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 DDX23Q9BUQ8 820 aaKnown RBP22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 ZCWPW1Q9H0M4 648 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 LRRC19Q9H756 370 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 DMAP1Q9NPF5 467 aaPredicted RBP22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 CNGB3Q9NQW8 809 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 HOMER3Q9NSC5 361 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 MARCH5Q9NX47 278 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 PCYOX1Q9UHG3 505 aa22.48■■□□□ 1.19
TSPAN3-202ENST00000346495 SF3B1O75533 1304 aaKnown RBP eCLIP22.48■■□□□ 1.191e-6■■■■■ 66.8
TSPAN3-202ENST00000346495 KIAA0355O15063 1070 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 PRPSAP2O60256 369 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 DAB1O75553 588 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 TJP3O95049 919 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 GALTP07902 379 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 CACNA2D1P54289 1103 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 ATP11AP98196 1134 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 LLGL1Q15334 1064 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 TFDP3Q5H9I0 405 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 VARS2Q5ST30 1063 aaKnown RBP22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 SH3PXD2AQ5TCZ1 1133 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 CMASQ8NFW8 434 aaPredicted RBP22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 HERPUD2Q9BSE4 406 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 HEMGNQ9BXL5 484 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 PNPLA8Q9NP80 782 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 NGRNQ9NPE2 291 aaKnown RBP22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 VWA8A3KMH1 1905 aa22.47■■□□□ 1.19
TSPAN3-202ENST00000346495 HHLA1C9JL84 531 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 TTI1O43156 1089 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 UPP2O95045 317 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 COILP38432 576 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 MATKP42679 507 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 CDR1P51861 262 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 BCAR1P56945 870 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 SMTNL2Q2TAL5 461 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 BEND6Q5SZJ8 279 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 FAM171A1Q5VUB5 890 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 CCDC137Q6PK04 289 aaKnown RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 FAM149B1Q96BN6 582 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 ACSF2Q96CM8 615 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 HINFPQ9BQA5 517 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 C11orf84Q9BUA3 381 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 ULBP1Q9BZM6 244 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 RAB17Q9H0T7 212 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 PRDM5Q9NQX1 630 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 TMEM30AQ9NV96 361 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 ZNF446Q9NWS9 450 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 EFR3BQ9Y2G0 817 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 CEP350Q5VT06 3117 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 PATJQ8NI35 1801 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 hCG_1818297A0A087WSY0 165 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 DGKIO75912 1065 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 SEC31AO94979 1220 aaKnown RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 FGFR3P22607 806 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 KDELR1P24390 212 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 CDKN2BP42772 138 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 NDUFV1P49821 464 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 DAOAP59103 153 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 YWHAZP63104 245 aaKnown RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 MRPL58Q14197 206 aaKnown RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 BOLA3Q53S33 107 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 FUT10Q6P4F1 479 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 ANKS1BQ7Z6G8 1248 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 KCTD6Q8NC69 237 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 CENPIQ92674 756 aaPredicted RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 PEBP4Q96S96 227 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 RHOBTB2Q9BYZ6 727 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 GPR62Q9BZJ7 368 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 PLEKHA4Q9H4M7 779 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 HCSTQ9UBK5 93 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 RASAL2Q9UJF2 1139 aa22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 UTP11Q9Y3A2 253 aaKnown RBP22.46■■□□□ 1.19
TSPAN3-202ENST00000346495 TRIM43BA6NCK2 446 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 OR6C75A6NL08 312 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 C3orf70A6NLC5 250 aaPredicted RBP22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 BHMG1C9JSJ3 638 aaPredicted RBP22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 EFCAB14O75071 495 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 AMHP03971 560 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 RAG1P15918 1043 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 NFE2Q16621 373 aaPredicted RBP22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 KCNT1Q5JUK3 1230 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 KAZNQ674X7 775 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 ZNF280DQ6N043 979 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 TTC27Q6P3X3 843 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 STRADAQ7RTN6 431 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 CEP57Q86XR8 500 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 DEFB106AQ8N104 65 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 EIF1ADQ8N9N8 165 aaKnown RBP22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 TEKT4Q8WW24 435 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 HSPH1Q92598 858 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 TRIM43Q96BQ3 446 aaPredicted RBP22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 TBCBQ99426 244 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 DCLK3Q9C098 648 aa22.45■■□□□ 1.18
TSPAN3-202ENST00000346495 ZSCAN5CA6NGD5 496 aaPredicted RBP22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 ATP8B1O43520 1251 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 KRT10P13645 584 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 NOS2P35228 1153 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 PTGIRP43119 386 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms