RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 NPTXRO95502 500 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 ELK3P41970 407 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 SNRNP48Q6IEG0 339 aaKnown RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 PRMT9Q6P2P2 845 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 FAM196AQ6ZSG2 479 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 DGCR14Q96DF8 476 aaKnown RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 TMEM94Q12767 1356 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 ANO4Q32M45 955 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 RIPOR1Q6ZS17 1223 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 DHFR2Q86XF0 187 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 MCOLN2Q8IZK6 566 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 ATPAF2Q8N5M1 289 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 TSPAN14Q8NG11 270 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 TMC2Q8TDI7 906 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 TRPC4APQ8TEL6 797 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 SIK2Q9H0K1 926 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 COPS7BQ9H9Q2 264 aaPredicted RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 AGAP1Q9UPQ3 857 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 SESN1Q9Y6P5 492 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 DGUOKQ16854 277 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 OLFML1Q6UWY5 402 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 TAS2R42Q7RTR8 314 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 ZNF34Q8IZ26 560 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 SH2D3AQ9BRG2 576 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 MXRA8Q9BRK3 442 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 C2CD2LO14523 706 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 GRAP2O75791 330 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 CCDC130P13994 396 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 ETNPPLQ8TBG4 499 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 LRRC40Q9H9A6 602 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 RPS6KA4O75676 772 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 MPOP05164 745 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 SSTR1P30872 391 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 PRKAA2P54646 552 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 BNIP1Q12981 228 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 PRKAA1Q13131 559 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 DENND5BQ6ZUT9 1274 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 OSCP1Q8WVF1 389 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 TMEM245Q9H330 911 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 IL18RAPO95256 599 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 PGM3O95394 542 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 TRAF2Q12933 501 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 FUT11Q495W5 492 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 ZNF720Q7Z2F6 126 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 EZH1Q92800 747 aaPredicted RBP18.66■□□□□ 0.58
SMC4-201ENST00000344722 C9orf16Q9BUW7 83 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 NDFIP2Q9NV92 336 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 DMTF1Q9Y222 760 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 AK5Q9Y6K8 562 aa18.66■□□□□ 0.58
SMC4-201ENST00000344722 LSM8O95777 96 aaKnown RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 ACADSBP45954 432 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 TMEM119Q4V9L6 283 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 LRRC8DQ7L1W4 858 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 UNC45BQ8IWX7 931 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 NCKIPSDQ9NZQ3 722 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 PDZK1P1A8MUH7 402 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 NEDD8Q15843 81 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 TJAP1Q5JTD0 557 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 RNF149Q8NC42 400 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 SGF29Q96ES7 293 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 CDRT15Q96T59 188 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 TUBA8Q9NY65 449 aaPredicted RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 RSL24D1Q9UHA3 163 aaKnown RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 NCANO14594 1321 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 RNF103O00237 685 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 UBDO15205 165 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 VAV1P15498 845 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 NFYCQ13952 458 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 SLC5A9Q2M3M2 681 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 SPDYAQ5MJ70 313 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 KDELC2Q7Z4H8 507 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 CCDC33Q8N5R6 958 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 SLC35C1Q96A29 364 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 PNMA5Q96PV4 448 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 NOL6Q9H6R4 1146 aaKnown RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 RGS5O15539 181 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 C1QBPQ07021 282 aaKnown RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 EMC2Q15006 297 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 KYAT3Q6YP21 454 aaKnown RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 ERO1BQ86YB8 467 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 ACTL9Q8TC94 416 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 PDCD6IPQ8WUM4 868 aaKnown RBP18.65■□□□□ 0.58
SMC4-201ENST00000344722 NT5C1AQ9BXI3 368 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 DEPDC5O75140 1603 aa18.65■□□□□ 0.58
SMC4-201ENST00000344722 DPPA5A6NC42 116 aa18.64■□□□□ 0.58
SMC4-201ENST00000344722 AGPSO00116 658 aa18.64■□□□□ 0.58
SMC4-201ENST00000344722 NDUFB10O96000 172 aa18.64■□□□□ 0.58
SMC4-201ENST00000344722 C2CD6Q53TS8 623 aa18.64■□□□□ 0.58
SMC4-201ENST00000344722 TMEM143Q96AN5 459 aa18.64■□□□□ 0.58
SMC4-201ENST00000344722 UBAP1Q9NZ09 502 aa18.64■□□□□ 0.58
SMC4-201ENST00000344722 WBP4O75554 376 aaKnown RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 ZNF235Q14590 738 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 KIZQ2M2Z5 673 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 KCNT1Q5JUK3 1230 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 SPOUT1Q5T280 376 aaKnown RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 DPP9Q86TI2 863 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms