RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CENPOQ9BU64 300 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ERVK-11Q9UQG0 969 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ICE1Q9Y2F5 2266 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FYNP06241 537 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CDK9P50750 372 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 BTG3Q14201 252 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NEK8Q86SG6 692 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SLC35F3Q8IY50 421 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NCOA7Q8NI08 942 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SLCO1B7G3V0H7 640 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SRGAP2BP0DMP2 458 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RRAGBQ5VZM2 374 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KLHL17Q6TDP4 642 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DBX2Q6ZNG2 339 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TMPRSS6Q8IU80 811 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RADILQ96JH8 1075 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KLHL32Q96NJ5 620 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CDC6Q99741 560 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FAM167BQ9BTA0 163 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NOC4LQ9BVI4 516 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 LIN7BQ9HAP6 207 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PREBQ9HCU5 417 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TRIM36Q9NQ86 728 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SNRKQ9NRH2 765 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MALT1Q9UDY8 824 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC85CA6NKD9 419 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ADAMTS2O95450 1211 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CDC16Q13042 620 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 HNRNPDQ14103 355 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CLCA4Q14CN2 919 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KLHL35Q6PF15 583 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PACRGLQ8N7B6 248 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DHX38Q92620 1227 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 COG8Q96MW5 612 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 AP1M1Q9BXS5 423 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PAIP1Q9H074 479 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ZC3H7BQ9UGR2 993 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ATP1A2P50993 1020 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 E2F2Q14209 437 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PYHIN1Q6K0P9 492 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 LAYNQ6UX15 382 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PRPF39Q86UA1 669 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SLC43A3Q8NBI5 491 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PEX13Q92968 403 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GBA3Q9H227 469 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PABPC3Q9H361 631 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ZSWIM6Q9HCJ5 1215 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NPHS2Q9NP85 383 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ADA2Q9NZK5 511 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RWDD2AQ9UIY3 292 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF221Q9UK13 617 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CEP290O15078 2479 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 LINC00854A0A1B0GVQ3 168 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DNM1LO00429 736 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SNX3O60493 162 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SIGIRRQ6IA17 410 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 OR52E8Q6IFG1 317 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PRMT9Q6P2P2 845 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DPP10Q8N608 796 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DENND6BQ8NEG7 585 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TOP1MTQ969P6 601 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FAM118BQ9BPY3 351 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SEMA4AQ9H3S1 761 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 IFT22Q9H7X7 185 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CCNB1IP1Q9NPC3 277 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CUEDC1Q9NWM3 386 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MED11Q9P086 117 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MYO1FO00160 1098 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KCNN4O15554 427 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ALDH2P05091 517 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TCF4P15884 667 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SPOUT1Q5T280 376 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FAM136AQ96C01 138 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CEP170P1Q96L14 293 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 AZI2Q9H6S1 392 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ATP6V1G2-DDX39BF2Z307 99 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NDUFS8O00217 210 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PSTPIP1O43586 416 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SNAP91O60641 907 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CRYABP02511 175 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 EIF4A3P38919 411 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 HNF4AP41235 474 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RPP38P78345 283 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PAOXQ6QHF9 649 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MAGOHBQ96A72 148 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TBCDQ9BTW9 1192 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 IMP3Q9NV31 184 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SLC8A2Q9UPR5 921 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LDOC1O95751 146 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RFX1P22670 979 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PTX3P26022 381 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZAP70P43403 619 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PRKCQQ04759 706 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 IKZF1Q13422 519 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PPP1R15BQ5SWA1 713 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SLC9A4Q6AI14 798 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 USP38Q8NB14 1042 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PELOQ9BRX2 385 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 FGD5Q6ZNL6 1462 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ILVBLA1L0T0 632 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms