RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 TCHHQ07283 1943 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SPDYE5A6NIY4 337 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ATP6V1G1O75348 118 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 UNC5CO95185 931 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 MUTP22033 750 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 IL10P22301 178 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SP100P23497 879 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 PPP3CAQ08209 521 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 LY6KQ17RY6 165 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SV2CQ496J9 727 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 EFHC1Q5JVL4 640 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 PGM2Q96G03 612 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 L3MBTL3Q96JM7 780 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 UNKQ9C0B0 810 aaKnown RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 CASS4Q9NQ75 786 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 DDIT4Q9NX09 232 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ARHGAP26Q9UNA1 814 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SNX5Q9Y5X3 404 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ADGRA2Q96PE1 1338 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 DYTNA2CJ06 578 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ABLIM1O14639 778 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 STRNO43815 780 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 TGM2P21980 687 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SERPINB5P36952 375 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SNAPC2Q13487 334 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 C6orf10Q5SRN2 563 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 RXFP2Q8WXD0 754 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 FAM136AQ96C01 138 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 CMTM5Q96DZ9 223 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 KCNK16Q96T55 309 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 MRPL42Q9Y6G3 142 aaKnown RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ZC3H11AO75152 810 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 KRT75O95678 551 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 IRF1P10914 325 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SSTR1P30872 391 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PBX1P40424 430 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ACADSBP45954 432 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 NUDT2P50583 147 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 AQP5P55064 265 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ECM1Q16610 540 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 GALNT15Q8N3T1 639 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 GANCQ8TET4 914 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 TRAPPC12Q8WVT3 735 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ZNF606Q8WXB4 792 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PPP2R3CQ969Q6 453 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 NR1H4Q96RI1 486 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SEPT5Q99719 369 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 TMEM120AQ9BXJ8 343 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 IKZF4Q9H2S9 585 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 DNAJC18Q9H819 358 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 STX18Q9P2W9 335 aaKnown RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PIK3CDO00329 1044 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ZSCAN5DPP0CG00 497 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ACO1P21399 889 aaKnown RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 CDH8P55286 799 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PAN2Q504Q3 1202 aaKnown RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 NOTUMQ6P988 496 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 MFSD7Q6UXD7 560 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PRUNE1Q86TP1 453 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 CATSPER1Q8NEC5 780 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PURBQ96QR8 312 aaKnown RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ADNPQ9H2P0 1102 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 TRPC7Q9HCX4 862 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 NINJ2Q9NZG7 142 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 KIF17Q9P2E2 1029 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SLC8A2Q9UPR5 921 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 DTNAQ9Y4J8 743 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 COMMD3-BMI1R4GMX3 469 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 FRMPD4Q14CM0 1322 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 A0A087WZ62 844 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SYNDIG1LA6NDD5 238 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SUPT3HB4E1H0 165 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ZNF263O14978 683 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SLC25A27O95847 323 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 TAF6P49848 677 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 RHBDL3P58872 404 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 LAMTOR4Q0VGL1 99 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 GRIK3Q13003 919 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 KRT33BQ14525 404 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 CNGA2Q16280 664 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 UGP2Q16851 508 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 MFSD14CQ5VZR4 134 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 NANOGNBQ7Z5D8 188 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SCUBE1Q8IWY4 988 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 DDHD1Q8NEL9 900 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 CEP19Q96LK0 163 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 FDXACB1Q9BRP7 624 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 UBP1Q9NZI7 540 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 LMCD1Q9NZU5 365 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 DNPEPQ9ULA0 475 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SATB2Q9UPW6 733 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PCDHGC5Q9Y5F6 944 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SPATA31A6Q5VVP1 1343 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SMAPO00193 183 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 MAN1A2O60476 641 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms