RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 NINJ2Q9NZG7 142 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 RSPH14Q9UHP6 348 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 KIAA1257Q9ULG3 409 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 ARL5CA6NH57 179 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 TRPA1O75762 1119 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 IL4RP24394 825 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 CACNA2D1P54289 1103 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 DPYSL3Q14195 570 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 MDH1BQ5I0G3 518 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 PAQR9Q6ZVX9 377 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 PIGZQ86VD9 579 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 SERINC5Q86VE9 423 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 PYROXD2Q8N2H3 581 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 B3GALNT2Q8NCR0 500 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 FAM149B1Q96BN6 582 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 RBM15Q96T37 977 aaKnown RBP eCLIP16.17■□□□□ 0.18
MBD1-203ENST00000339998 KCNK16Q96T55 309 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 FEZ2Q9UHY8 353 aaPredicted RBP16.17■□□□□ 0.18
MBD1-203ENST00000339998 MFHAS1Q9Y4C4 1052 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 TTC3P53804 2025 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 EIF3HO15372 352 aaKnown RBP eCLIP16.17■□□□□ 0.185e-7■■□□□ 12.6
MBD1-203ENST00000339998 SDC4P31431 198 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 GSCP56915 257 aaPredicted RBP16.17■□□□□ 0.18
MBD1-203ENST00000339998 SKOR1P84550 965 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 ADIGQ0VDE8 80 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 ANKRD52Q8NB46 1076 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 SPATA18Q8TC71 538 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 SENP8Q96LD8 212 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 SNRNP25Q9BV90 132 aaKnown RBP16.17■□□□□ 0.18
MBD1-203ENST00000339998 SPC25Q9HBM1 224 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 HOMER3Q9NSC5 361 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 MYBPHLA2RUH7 354 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 LSP1P33241 339 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 SLMAPQ14BN4 828 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 HIBCHQ6NVY1 386 aaPredicted RBP16.16■□□□□ 0.18
MBD1-203ENST00000339998 HFE2Q6ZVN8 426 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 ZNF560Q96MR9 790 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
MBD1-203ENST00000339998 SAYSD1Q9NPB0 183 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 GDAP2Q9NXN4 497 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 RBP3P10745 1247 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 MDH1P40925 334 aaKnown RBP16.16■□□□□ 0.18
MBD1-203ENST00000339998 CCT5P48643 541 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 MAP3K7CLP57077 242 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 EIF3EP60228 445 aaKnown RBP16.16■□□□□ 0.18
MBD1-203ENST00000339998 COPS2P61201 443 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 BST2Q10589 180 aaKnown RBP16.16■□□□□ 0.18
MBD1-203ENST00000339998 IRF5Q13568 498 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 BBS12Q6ZW61 710 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 UNC93AQ86WB7 457 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 ANKMY2Q8IV38 441 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 CRYBG2Q8N1P7 616 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 CCDC185Q8N715 623 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 ADAM32Q8TC27 787 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 SELENOSQ9BQE4 189 aa16.16■□□□□ 0.18
MBD1-203ENST00000339998 MYO18AQ92614 2054 aaKnown RBP16.16■□□□□ 0.18
MBD1-203ENST00000339998 RASGRF2O14827 1237 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 RGS16O15492 202 aaPredicted RBP16.15■□□□□ 0.18
MBD1-203ENST00000339998 BRCC3P46736 316 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 AUHQ13825 339 aaKnown RBP16.15■□□□□ 0.18
MBD1-203ENST00000339998 KRT81Q14533 505 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 PCBP1Q15365 356 aaKnown RBP eCLIP16.15■□□□□ 0.18
MBD1-203ENST00000339998 SV2CQ496J9 727 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 FAXCQ5TGI0 409 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 FAM131BQ86XD5 332 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 CCDC13Q8IYE1 715 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 CYP4X1Q8N118 509 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 MLXIPLQ9NP71 852 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 CRTAC1Q9NQ79 661 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 DDX43Q9NXZ2 648 aaKnown RBP16.15■□□□□ 0.18
MBD1-203ENST00000339998 SLC12A6Q9UHW9 1150 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 ZNF638Q14966 1978 aaKnown RBP16.15■□□□□ 0.18
MBD1-203ENST00000339998 F5H423 210 aaPredicted RBP16.15■□□□□ 0.18
MBD1-203ENST00000339998 DNALI1O14645 258 aaPredicted RBP16.15■□□□□ 0.18
MBD1-203ENST00000339998 TTC4O95801 387 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 ITGB1P05556 798 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 RPL22P35268 128 aaKnown RBP16.15■□□□□ 0.18
MBD1-203ENST00000339998 HTRA3P83110 453 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 ARHGAP17Q68EM7 881 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 CD99L2Q8TCZ2 262 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 MED10Q9BTT4 135 aa16.15■□□□□ 0.18
MBD1-203ENST00000339998 THP07101 528 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 PTPN1P18031 435 aaKnown RBP16.14■□□□□ 0.17
MBD1-203ENST00000339998 YY1P25490 414 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 BCAT1P54687 386 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 PPP2R2AP63151 447 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 MSS51Q4VC12 460 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 GPRIN1Q7Z2K8 1008 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 PCDH19Q8TAB3 1148 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 NKD2Q969F2 451 aaPredicted RBP16.14■□□□□ 0.17
MBD1-203ENST00000339998 TBCBQ99426 244 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 MAK16Q9BXY0 300 aaKnown RBP16.14■□□□□ 0.17
MBD1-203ENST00000339998 DHX35Q9H5Z1 703 aaKnown RBP16.14■□□□□ 0.17
MBD1-203ENST00000339998 MRPL42Q9Y6G3 142 aaKnown RBP16.14■□□□□ 0.17
MBD1-203ENST00000339998 KIF3CO14782 793 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 GBP1P32455 592 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 CTCFP49711 727 aaPredicted RBP16.14■□□□□ 0.17
MBD1-203ENST00000339998 MGAT3Q09327 533 aa16.14■□□□□ 0.17
MBD1-203ENST00000339998 SYDE1Q6ZW31 735 aaPredicted RBP16.14■□□□□ 0.17
MBD1-203ENST00000339998 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms