RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 APOC2P02655 101 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 TFE3P19532 575 aaPredicted RBP10.13□□□□□ -0.79
MSL3-202ENST00000337339 SLC26A2P50443 739 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 RABGGTBP53611 331 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 SNAPC2Q13487 334 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 FAM131BQ86XD5 332 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 ECHDC2Q86YB7 292 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 EIF2AQ9BY44 585 aaKnown RBP10.13□□□□□ -0.79
MSL3-202ENST00000337339 DPEP3Q9H4B8 488 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 IGKV6-21A0A0C4DH24 114 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 SSC5DA1L4H1 1573 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 MAGEB2O15479 319 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 CREB3O43889 395 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 CBX6O95503 412 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 MCF2P10911 925 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 PYGBP11216 843 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 ACAT1P24752 427 aaKnown RBP10.13□□□□□ -0.79
MSL3-202ENST00000337339 CRADDP78560 199 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 ENPEPQ07075 957 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 ARHGAP1Q07960 439 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 FAAP100Q0VG06 881 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 NME3Q13232 169 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 ZNF484Q5JVG2 852 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 UBR7Q8N806 425 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 PPP1R14CQ8TAE6 165 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 CYTH2Q99418 400 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 CACNG4Q9UBN1 327 aa10.13□□□□□ -0.79
MSL3-202ENST00000337339 ZC3H7BQ9UGR2 993 aaKnown RBP10.13□□□□□ -0.79
MSL3-202ENST00000337339 CLUHO75153 1309 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 CCL15-CCL14A0A0B4J2E2 113 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 CFAP69A5D8W1 941 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 C2orf71A6NGG8 1288 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 APOL1O14791 398 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 LGR5O75473 907 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 KRT16P08779 473 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 YY1P25490 414 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 EPHX2P34913 555 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 ZNF143P52747 638 aaPredicted RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 NR1H3Q13133 447 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 GRM1Q13255 1194 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 CCL15Q16663 113 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 CCDC142Q17RM4 750 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 MTHFD1LQ6UB35 978 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 POLNQ7Z5Q5 900 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 LRRC6Q86X45 466 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 MYLK2Q9H1R3 596 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 LHX5Q9H2C1 402 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 RBBP6Q7Z6E9 1792 aaKnown RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 TCRBV5S1A1TA0A578 114 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 NQO1P15559 274 aaKnown RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 GCAP28676 217 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 MAP2K2P36507 400 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 SESN2P58004 480 aaPredicted RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 NCALDP61601 193 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 ZNF200P98182 395 aaPredicted RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 IFRD2Q12894 506 aaPredicted RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 MTFR1Q15390 333 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 TNFAIP8L3Q5GJ75 292 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 MROH9Q5TGP6 573 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 FOXP3Q9BZS1 431 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 SNX25Q9H3E2 840 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 ASB7Q9H672 318 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 TTLL3Q9Y4R7 772 aa10.12□□□□□ -0.79
MSL3-202ENST00000337339 ATXN2Q99700 1313 aaKnown RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 POLR2AP24928 1970 aaKnown RBP10.12□□□□□ -0.79
MSL3-202ENST00000337339 TCRBV9S1A1TA0A576 114 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 TRIM49D1C9J1S8 452 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 TSPAN1O60635 241 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 ATP6V1G2O95670 118 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 CYP3A5P20815 502 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 PROZP22891 400 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 LMO2P25791 158 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 GBE1Q04446 702 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 KLHL38Q2WGJ6 581 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 LACTB2Q53H82 288 aaPredicted RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 RFX8Q6ZV50 586 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 MTDHQ86UE4 582 aaKnown RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 DNAJB3Q8WWF6 145 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 ZNF75CPQ92670 426 aaPredicted RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 ATXN7L3BQ96GX2 97 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 ZMAT2Q96NC0 199 aaKnown RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 MED10Q9BTT4 135 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 SNRNP25Q9BV90 132 aaKnown RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 GRID1Q9ULK0 1009 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 SMG5Q9UPR3 1016 aaKnown RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 PHIPQ8WWQ0 1821 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 KIF13BQ9NQT8 1826 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 LTBP3Q9NS15 1303 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 C3orf70A6NLC5 250 aaPredicted RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 ASMTLO95671 621 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 TROVE2P10155 538 aaKnown RBP eCLIP10.11□□□□□ -0.79
MSL3-202ENST00000337339 RARBP10826 455 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 GHRP10912 638 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 SESN3P58005 492 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 XRCC4Q13426 336 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms