RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CACNB2Q08289 660 aaPredicted RBP12.68□□□□□ -0.38
FN1-202ENST00000336916 PCSK7Q16549 785 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 SLC45A4Q5BKX6 768 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 ASB2Q96Q27 587 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 MYO1CO00159 1063 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 IRF1P10914 325 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 PSEN1P49768 467 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 CCNG1P51959 295 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 CES5AQ6NT32 575 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 STK40Q8N2I9 435 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 ETNK1Q9HBU6 452 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 ERN1O75460 977 aaKnown RBP12.68□□□□□ -0.38
FN1-202ENST00000336916 PARNO95453 639 aaKnown RBP12.68□□□□□ -0.38
FN1-202ENST00000336916 CUL3Q13618 768 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 KIZQ2M2Z5 673 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 PRMT9Q6P2P2 845 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 DDX42Q86XP3 938 aaKnown RBP eCLIP12.68□□□□□ -0.38
FN1-202ENST00000336916 BTN2A2Q8WVV5 523 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 JMJD4Q9H9V9 463 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 USP15Q9Y4E8 981 aaPredicted RBP12.68□□□□□ -0.38
FN1-202ENST00000336916 KIF13AQ9H1H9 1805 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 FGF19O95750 216 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 CYP2A6P11509 494 aaPredicted RBP12.68□□□□□ -0.38
FN1-202ENST00000336916 TMEM86AQ8N2M4 240 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 KCNB2Q92953 911 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 SPATC1LQ9H0A9 340 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 DDX47Q9H0S4 455 aaKnown RBP12.68□□□□□ -0.38
FN1-202ENST00000336916 RAD21L1Q9H4I0 556 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 ADAM21Q9UKJ8 722 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 WDR47O94967 919 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 ITGB6P18564 788 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 PEX19P40855 299 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 RPAINQ86UA6 219 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 PHACTR4Q8IZ21 702 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 EME1Q96AY2 570 aa12.68□□□□□ -0.38
FN1-202ENST00000336916 A0A0A6YYK5 440 aaPredicted RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 CYP11B1P15538 503 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 MAPK8P45983 427 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 ALG11Q2TAA5 492 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 SPATA21Q7Z572 469 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 HINFPQ9BQA5 517 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 PRKD2Q9BZL6 878 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 PXMP2Q9NR77 195 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 USP18Q9UMW8 372 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 MAPK9P45984 424 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 CCDC149Q6ZUS6 474 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 CDR2LQ86X02 465 aaPredicted RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 KSR1Q8IVT5 923 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 ERP44Q9BS26 406 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 SLC39A8Q9C0K1 460 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 KCNQ2O43526 872 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 RBP3P10745 1247 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 MYL6P60660 151 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 FKBP1BP68106 108 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 ZNF655Q8N720 491 aaPredicted RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 RAB23Q9ULC3 237 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 TMCC3Q9ULS5 477 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 VPS4BO75351 444 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 FKBP9O95302 570 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 DMTNQ08495 405 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 SGCGQ13326 291 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 FKBP9P1Q75LS8 142 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 GPC2Q8N158 579 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 TMEM117Q9H0C3 514 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 CTNNAL1Q9UBT7 734 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 AMACRQ9UHK6 382 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 KPNA5O15131 536 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 MBL2P11226 248 aaPredicted RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 AKR1A1P14550 325 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 TCEA2Q15560 299 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 CYP2A7P20853 494 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 SOAT1P35610 550 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 CHI3L1P36222 383 aaPredicted RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 PEX5P50542 639 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 BST2Q10589 180 aaKnown RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 SLC30A5Q8TAD4 765 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 MSRAQ9UJ68 235 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 UBR2Q8IWV8 1755 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 SRP72O76094 671 aaKnown RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 IFNGR2P38484 337 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 CTXN3Q4LDR2 81 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
FN1-202ENST00000336916 BARX2Q9UMQ3 279 aaPredicted RBP12.67□□□□□ -0.38
FN1-202ENST00000336916 MGAT4DA6NG13 374 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 EIF3HO15372 352 aaKnown RBP eCLIP12.66□□□□□ -0.381e-34■□□□□ 10.2
FN1-202ENST00000336916 RGS7P49802 495 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 UROC1Q96N76 676 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 VTI1BQ9UEU0 232 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 M0QYT0 321 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 QSOX1O00391 747 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 IQSEC1Q6DN90 963 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 C16orf62Q7Z3J2 963 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 ATXN7L3BQ96GX2 97 aa12.66□□□□□ -0.38
FN1-202ENST00000336916 SERAC1Q96JX3 654 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms