RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KRT7P08729 469 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 VDRP11473 427 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 ELK3P41970 407 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 SCTRP47872 440 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 MICALCLQ6ZW33 695 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 TBC1D1Q86TI0 1168 aaPredicted RBP9.24□□□□□ -0.93
SNCA-201ENST00000336904 UNC5BQ8IZJ1 945 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 STKLD1Q8NE28 680 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 P3H4Q92791 437 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 MCRS1Q96EZ8 462 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 ZNF518BQ9C0D4 1074 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 GBA2Q9HCG7 927 aaPredicted RBP9.24□□□□□ -0.93
SNCA-201ENST00000336904 VTA1Q9NP79 307 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 HOMER3Q9NSC5 361 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 DDX56Q9NY93 547 aaKnown RBP9.24□□□□□ -0.93
SNCA-201ENST00000336904 C2orf71A6NGG8 1288 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 CDH16O75309 829 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 GPR32O75388 356 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 UBOX5O94941 541 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 APRTP07741 180 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 KRT4P19013 534 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 ENPEPQ07075 957 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 IFRD2Q12894 506 aaPredicted RBP9.24□□□□□ -0.93
SNCA-201ENST00000336904 FAM47CQ5HY64 1035 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 TWF2Q6IBS0 349 aaKnown RBP9.24□□□□□ -0.93
SNCA-201ENST00000336904 MFSD5Q6N075 450 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 CENPUQ71F23 418 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 PLEKHH3Q7Z736 793 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 PRPF39Q86UA1 669 aaKnown RBP9.24□□□□□ -0.93
SNCA-201ENST00000336904 CTAGE3PQ8IX95 158 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 FAF2Q96CS3 445 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 LHX5Q9H2C1 402 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 ADAMTS10Q9H324 1103 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 UBN1Q9NPG3 1134 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 KBTBD13C9JR72 458 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 IGF2BP3O00425 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNCA-201ENST00000336904 P4HA1P13674 534 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 HNRNPH1P31943 449 aaKnown RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 ZNF143P52747 638 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 HDAC4P56524 1084 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ROR1Q01973 937 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 NME3Q13232 169 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 BMPR2Q13873 1038 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 TNFAIP8L3Q5GJ75 292 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 OLFML1Q6UWY5 402 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 SYDE1Q6ZW31 735 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 BBS12Q6ZW61 710 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 PALM2Q8IXS6 379 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 PCDH19Q8TAB3 1148 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNCA-201ENST00000336904 PAAF1Q9BRP4 392 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ASB7Q9H672 318 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 PCDH9Q9HC56 1237 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ASNSD1Q9NWL6 643 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 NKIRAS1Q9NYS0 192 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 SEPT10Q9P0V9 454 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 SLC17A7Q9P2U7 560 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ZNF638Q14966 1978 aaKnown RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 SMIM28A0A1B0GU29 152 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 A8MUI8 341 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 PGK1P00558 417 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ITGAVP06756 1048 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 IL4RP24394 825 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ADRA1DP25100 572 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 SDC4P31431 198 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 GTF2A2P52657 109 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 IRX4P78413 519 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 SLC10A2Q12908 348 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 ZNF268Q14587 947 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 SPDYCQ5MJ68 293 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 C9orf57Q5W0N0 161 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 SLC27A1Q6PCB7 646 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 MPP5Q8N3R9 675 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 PQLC3Q8N755 202 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 NIPA2Q8N8Q9 360 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 CCDC63Q8NA47 563 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 CCT6BQ92526 530 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 MAML1Q92585 1016 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 NKD2Q969F2 451 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 SNX27Q96L92 541 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 PAFAH2Q99487 392 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 GCOM2Q9BZD3 368 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 SLC40A1Q9NP59 571 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ITGA11Q9UKX5 1188 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 CCDC78A2IDD5 438 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 CREB3O43889 395 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 AMHP03971 560 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 C6orf222P0C671 652 aaPredicted RBP9.23□□□□□ -0.93
SNCA-201ENST00000336904 AMPD1P23109 780 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 BCAR1P56945 870 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 HUNKP57058 714 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 MGAT5Q09328 741 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 ADIGQ0VDE8 80 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 GRB14Q14449 540 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 MFSD10Q14728 455 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 KBTBD12Q3ZCT8 623 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 LRRC38Q5VT99 294 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 LCLAT1Q6UWP7 414 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 HFE2Q6ZVN8 426 aa9.23□□□□□ -0.93
SNCA-201ENST00000336904 TRABD2AQ86V40 505 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms