RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 C4BPAP04003 597 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 NUDT17P0C025 328 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 OSBPP22059 807 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 IL1R2P27930 398 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 GRIA1P42261 906 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 EFNA5P52803 228 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 AQP5P55064 265 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 TFDP2Q14188 446 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 CCDC142Q17RM4 750 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 VSTM1Q6UX27 236 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 ECHDC2Q86YB7 292 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 GBP7Q8N8V2 638 aaPredicted RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 BHMTQ93088 406 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 CAMKK2Q96RR4 588 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 LGMNQ99538 433 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 UGT1A7Q9HAW7 530 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 UGT1A10Q9HAW8 530 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 UGT1A8Q9HAW9 530 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 ZNF214Q9UL59 606 aaPredicted RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 URB1O60287 2271 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 BTNL10A8MVZ5 291 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 BNIP3LO60238 219 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 SETSIPP0DME0 302 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 ACO1P21399 889 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 GPD1P21695 349 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 GNL1P36915 607 aaPredicted RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 WDR4P57081 412 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 RABGAP1LQ5R372 815 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 LAYNQ6UX15 382 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 ABHD15Q6UXT9 468 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 PRPF39Q86UA1 669 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 RFWD2Q8NHY2 731 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 CDKL2Q92772 493 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 L3MBTL3Q96JM7 780 aaPredicted RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 DPP3Q9NY33 737 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 DLGAP2Q9P1A6 1054 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 XIRP1Q702N8 1843 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 DFFAO00273 331 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 CLDN5O00501 218 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 CES2O00748 559 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 AIM2O14862 343 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 PSTPIP1O43586 416 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 LRCH4O75427 683 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 PDE5AO76074 875 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 ARIH2O95376 493 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 HMBSP08397 361 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 SLC12A2P55011 1212 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 MXD4Q14582 209 aaPredicted RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 MAP1SQ66K74 1059 aaPredicted RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 MPZL3Q6UWV2 235 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 DSTYKQ6XUX3 929 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 TAS1R3Q7RTX0 852 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 ALYREFQ86V81 257 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 APOBEC3FQ8IUX4 373 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 TNS4Q8IZW8 715 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 SLC7A14Q8TBB6 771 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 CLEC4CQ8WTT0 213 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 TMEM176AQ96HP8 235 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 MFSD14AQ96MC6 490 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 TTC25Q96NG3 672 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 GPR25O00155 361 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 MAFGO15525 162 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 KRT38O76015 456 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 HSPA4LO95757 839 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 UNGP13051 313 aaPredicted RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 KDELR1P24390 212 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 NCALDP61601 193 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 CENPCQ03188 943 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 KLHL38Q2WGJ6 581 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 IER5Q5VY09 327 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 PYROXD2Q8N2H3 581 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 CCHCR1Q8TD31 782 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 CKAP2Q8WWK9 683 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 ATXN2LQ8WWM7 1075 aaKnown RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 C18orf25Q96B23 403 aaPredicted RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 MAGEB18Q96M61 343 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 TBC1D10AQ9BXI6 508 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 TMEM120AQ9BXJ8 343 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 RPS6KL1Q9Y6S9 549 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 hCG_2014768A0A024R1R8 64 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 E9PBE3 544 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 M0QYT0 321 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 KLHL41O60662 606 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 HUS1O60921 280 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 LYPLA1O75608 230 aaPredicted RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 ERBB2P04626 1255 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 TAC1P20366 129 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 MMP8P22894 467 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 SULT1E1P49888 294 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 PTK6Q13882 451 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 CEP128Q6ZU80 1094 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 OTOAQ7RTW8 1153 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 ZNF572Q7Z3I7 529 aaPredicted RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 NLGN2Q8NFZ4 835 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 HAPLN2Q9GZV7 340 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms