RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 FHOD1Q9Y613 1164 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SPACA6W5XKT8 324 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 LOC100653049A0A140TA62 436 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 H3BNX3 289 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 HIST2H2ACQ16777 129 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ZFP69Q49AA0 526 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 EAPPQ56P03 285 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SLC27A3Q5K4L6 730 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 HIST2H2AA3Q6FI13 130 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 PDXDC2PQ6P474 469 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SPAG16Q8N0X2 631 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 NAT9Q9BTE0 207 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 L1RE1Q9UN81 338 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SQORQ9Y6N5 450 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 A0A1W2PQJ5 194 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 PAICSP22234 425 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SLC26A3P40879 764 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ARF5P84085 180 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ESRP1Q6NXG1 681 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ATG14Q6ZNE5 492 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 STK32AQ8WU08 396 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ATXN2LQ8WWM7 1075 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 MYLPFQ96A32 169 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 UGT2B28Q9BY64 529 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 EHD1Q9H4M9 534 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 RPS6KB2Q9UBS0 482 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SLC39A10Q9ULF5 831 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 GSTK1Q9Y2Q3 226 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SMCO1Q147U7 214 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 MAPK6Q16659 721 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 DPP9Q86TI2 863 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 GLYCTKQ8IVS8 523 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 UTP15Q8TED0 518 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CAVIN3Q969G5 261 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 EAF2Q96CJ1 260 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 FAM111AQ96PZ2 611 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 BCL2L14Q9BZR8 327 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 C2orf40Q9H1Z8 148 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 COPRSQ9NQ92 184 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 WWOXQ9NZC7 414 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TSR3Q9UJK0 312 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 EFR3BQ9Y2G0 817 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ERVV-2B6SEH9 535 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 LBPP18428 481 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TGM2P21980 687 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 NOS3P29474 1203 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 RHAGQ02094 409 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 NME3Q13232 169 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 STILQ15468 1287 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 PREPLQ4J6C6 727 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 MACC1Q6ZN28 852 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 PID1Q7Z2X4 250 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 YTHDF3Q7Z739 585 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 WDR48Q8TAF3 677 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TMEM138Q9NPI0 162 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 THAP1Q9NVV9 213 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TRIM17Q9Y577 477 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 HAT1O14929 419 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 KPNA5O15131 536 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 LDLRP01130 860 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF806P0C7X5 589 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ALOX15P16050 662 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 DCAF4L1Q3SXM0 396 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TNFAIP8L3Q5GJ75 292 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TBCELQ5QJ74 424 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ERICH5Q6P6B1 374 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ULK3Q6PHR2 472 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF605Q86T29 641 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ADI1Q9BV57 179 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 MOV10Q9HCE1 1003 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 NCKIPSDQ9NZQ3 722 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CIDEBQ9UHD4 219 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 DNAJC13O75165 2243 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SNAP91O60641 907 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 FDFT1P37268 417 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CCNIQ14094 377 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SLC29A2Q14542 456 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 GADL1Q6ZQY3 521 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 URGCPQ8TCY9 931 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 Q96MT0 163 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 APOL5Q9BWW9 433 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TCF7L2Q9NQB0 619 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 AATKQ6ZMQ8 1374 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 UBOX5O94941 541 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 RPN2P04844 631 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ATP6V1C1P21283 382 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 GTF2H1P32780 548 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 OSTNP61366 133 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CAMK1DQ8IU85 385 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF560Q96MR9 790 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 PIGSQ96S52 555 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 KCND2Q9NZV8 630 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 IRAK3Q9Y616 596 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ARHGEF40Q8TER5 1519 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 MTERF2Q49AM1 385 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CLHC1Q8NHS4 586 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 C18orf8Q96DM3 657 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 DSN1Q9H410 356 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 VTI1BQ9UEU0 232 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CHKBQ9Y259 395 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms