RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 ASTN2O75129 1339 aaPredicted RBP16.93■□□□□ 0.3
UPK3B-202ENST00000334348 ARHGAP42A6NI28 874 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 SDR42E2A6NKP2 422 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 TRIM49D1C9J1S8 452 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 KBTBD13C9JR72 458 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 C4BPAP04003 597 aaKnown RBP16.93■□□□□ 0.3
UPK3B-202ENST00000334348 CALB1P05937 261 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 SPP2Q13103 211 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 CHI3L2Q15782 390 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 NTPCRQ9BSD7 190 aaKnown RBP16.93■□□□□ 0.3
UPK3B-202ENST00000334348 PNPLA8Q9NP80 782 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 AGTPBP1Q9UPW5 1226 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 HBS1LQ9Y450 684 aaKnown RBP16.93■□□□□ 0.3
UPK3B-202ENST00000334348 TEX264Q9Y6I9 313 aa16.93■□□□□ 0.3
UPK3B-202ENST00000334348 BTBD19C9JJ37 291 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 SNNO75324 88 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 OR6B1O95007 311 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 C6orf222P0C671 652 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 KITP10721 976 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 TGFB2P61812 414 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 DYNLT1P63172 113 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 WASHC5Q12768 1159 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 UBAP2LQ14157 1087 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 DNAJC24Q6P3W2 148 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 DCUN1D2Q6PH85 259 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 BBS12Q6ZW61 710 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 NIPA1Q7RTP0 329 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 NCAPG2Q86XI2 1143 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 NUDCD3Q8IVD9 361 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 TAB3Q8N5C8 712 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 NIPA2Q8N8Q9 360 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 BTBD9Q96Q07 612 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 ZC3H12CQ9C0D7 883 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 ZNF395Q9H8N7 513 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 ZSCAN9O15535 394 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 PEX1O43933 1283 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 KRT37O76014 449 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 SNRPAP09012 282 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 WEE2P0C1S8 567 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 YWHAGP61981 247 aaKnown RBP eCLIP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 IRX4P78413 519 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 MRPS5P82675 430 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 CCNIQ14094 377 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 UGCGQ16739 394 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 XKR9Q5GH70 373 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 TDRD10Q5VZ19 366 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 LMBRD2Q68DH5 695 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 POLNQ7Z5Q5 900 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 UNC45BQ8IWX7 931 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 SHKBP1Q8TBC3 707 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 MIPOL1Q8TD10 442 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 SLC26A7Q8TE54 656 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 PRICKLE1Q96MT3 831 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 APOBEC3GQ9HC16 384 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 AGO4Q9HCK5 861 aaKnown RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 MKS1Q9NXB0 559 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 MARCOQ9UEW3 520 aaPredicted RBP16.92■□□□□ 0.3
UPK3B-202ENST00000334348 ZNF180Q9UJW8 692 aa16.92■□□□□ 0.3
UPK3B-202ENST00000334348 MEI4A8MW99 385 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 CASQ2O14958 399 aaPredicted RBP16.91■□□□□ 0.3
UPK3B-202ENST00000334348 CST8O60676 142 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 PEX2P28328 305 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 BASP1P80723 227 aaKnown RBP16.91■□□□□ 0.3
UPK3B-202ENST00000334348 SLC25A3Q00325 362 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 TAP1Q03518 808 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 PSMD6Q15008 389 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 PGM2L1Q6PCE3 622 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 SP8Q8IXZ3 490 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 APBB2Q92870 758 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 ANKEF1Q9NU02 776 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 HNRNPDLO14979 420 aaKnown RBP16.91■□□□□ 0.3
UPK3B-202ENST00000334348 HNRNPRO43390 633 aaKnown RBP16.91■□□□□ 0.3
UPK3B-202ENST00000334348 VNN1O95497 513 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 SMIM18P0DKX4 95 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 TNNI1P19237 187 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 RPL5P46777 297 aaKnown RBP16.91■□□□□ 0.3
UPK3B-202ENST00000334348 BTKQ06187 659 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 DPYSL3Q14195 570 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 SAMD3Q8N6K7 520 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 ZNF606Q8WXB4 792 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 BSNDQ8WZ55 320 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 SIKE1Q9BRV8 207 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 SMYD3Q9H7B4 428 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 RPS6KL1Q9Y6S9 549 aa16.91■□□□□ 0.3
UPK3B-202ENST00000334348 PPEF1O14829 653 aaPredicted RBP16.9■□□□□ 0.3
UPK3B-202ENST00000334348 VILLO15195 856 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
UPK3B-202ENST00000334348 C1QAP02745 245 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 CCDC166P0CW27 439 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 DOK7Q18PE1 504 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 LGSNQ5TDP6 509 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 B3GNT6Q6ZMB0 384 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 TTLL6Q8N841 843 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 EBF4Q9BQW3 602 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 C20orf27Q9GZN8 174 aa16.9■□□□□ 0.3
UPK3B-202ENST00000334348 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms