RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MYL3P08590 195 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 SNX16P57768 344 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 GAD2Q05329 585 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 KRT81Q14533 505 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 NOMO1Q15155 1222 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 TMED2Q15363 201 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 SCYL2Q6P3W7 929 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 CAPN12Q6ZSI9 719 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 CCDC13Q8IYE1 715 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 ANKRD42Q8N9B4 389 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 KBTBD7Q8WVZ9 684 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 MAML1Q92585 1016 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 B3GNT5Q9BYG0 378 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 PHACTR1Q9C0D0 580 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 ACTL7BQ9Y614 415 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 IGF2BP3O00425 579 aaKnown RBP eCLIP18.17■□□□□ 0.5
DDX28-201ENST00000332395 BANF1O75531 89 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 VIMP08670 466 aaKnown RBP18.17■□□□□ 0.5
DDX28-201ENST00000332395 BEX3Q00994 111 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 ROR1Q01973 937 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 MPP2Q14168 576 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 BOLA3Q53S33 107 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 FAM47CQ5HY64 1035 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 TDRPQ86YL5 185 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 ZDHHC17Q8IUH5 632 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 MAP7D3Q8IWC1 876 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 TAB3Q8N5C8 712 aaPredicted RBP18.17■□□□□ 0.5
DDX28-201ENST00000332395 C7orf31Q8N865 590 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.17■□□□□ 0.5
DDX28-201ENST00000332395 P3H4Q92791 437 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 RNF157Q96PX1 679 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
DDX28-201ENST00000332395 TRIP12Q14669 1992 aaPredicted RBP18.17■□□□□ 0.5
DDX28-201ENST00000332395 KPNA7A9QM74 516 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 RASA4BC9J798 803 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 SPTLC1O15269 473 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 RASA4O43374 803 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 FGFR1P11362 822 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 CCDC130P13994 396 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 ARL4CP56559 192 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 PDK2Q15119 407 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 ZC3H18Q86VM9 953 aaKnown RBP18.16■□□□□ 0.5
DDX28-201ENST00000332395 ANKMY2Q8IV38 441 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 GPATCH11Q8N954 259 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 TEKT4Q8WW24 435 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 ZNF560Q96MR9 790 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 GPATCH2LQ9NWQ4 482 aa18.16■□□□□ 0.5
DDX28-201ENST00000332395 POC1B-GALNT4F8VUJ3 575 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 PDGFRBP09619 1106 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 KCNE1P15382 129 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 IL4RP24394 825 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 ZC3H12AQ5D1E8 599 aaKnown RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 XKR4Q5GH76 650 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 FNBP1LQ5T0N5 605 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 CST9Q5W186 159 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 DARS2Q6PI48 645 aaKnown RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 PIGWQ7Z7B1 504 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 CCDC197Q8NCU1 140 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 USP6NLQ92738 828 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 TBCBQ99426 244 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 AP5M1Q9H0R1 490 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 RRAGCQ9HB90 399 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 MLXIPLQ9NP71 852 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 GDAP2Q9NXN4 497 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 TCRBV7S3A2A0A539 114 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 XPOTO43592 962 aaKnown RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 TMEM63AO94886 807 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 DESP17661 470 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 CYP2B6P20813 491 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 LMO2P25791 158 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 ADORA2BP29275 332 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 STIP1P31948 543 aaKnown RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 GNL1P36915 607 aaPredicted RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 BCAT1P54687 386 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 NRLP54845 237 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 HUNKP57058 714 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 BST2Q10589 180 aaKnown RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 NR1H3Q13133 447 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 TAF1CQ15572 869 aaPredicted RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 MSS51Q4VC12 460 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 CCDC121Q6ZUS5 278 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 TAX1BP1Q86VP1 789 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 CRYBG2Q8N1P7 616 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 ANKRD52Q8NB46 1076 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 SNRNP25Q9BV90 132 aaKnown RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 NSRP1Q9H0G5 558 aaKnown RBP18.15■□□□□ 0.5
DDX28-201ENST00000332395 GOLGA2P5Q9HBQ8 144 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 PCDH18Q9HCL0 1135 aa18.15■□□□□ 0.5
DDX28-201ENST00000332395 C17orf102A2RUQ5 167 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 SMAPO00193 183 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 PNPLA4P41247 253 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 CRYBB1P53674 252 aaPredicted RBP18.14■□□□□ 0.49
DDX28-201ENST00000332395 HDAC4P56524 1084 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 GPX6P59796 221 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 BASP1P80723 227 aaKnown RBP18.14■□□□□ 0.49
DDX28-201ENST00000332395 SOX4Q06945 474 aaPredicted RBP18.14■□□□□ 0.49
DDX28-201ENST00000332395 ADCY1Q08828 1119 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 ZNF618Q5T7W0 954 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 C1orf228Q6PIY5 440 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms