RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 OR1D2P34982 312 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 BASP1P80723 227 aaKnown RBP16.61■□□□□ 0.25
PDGFB-201ENST00000331163 DUSP4Q13115 394 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 MEI1Q5TIA1 1274 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 C15orf39Q6ZRI6 1047 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 MAGEB5Q9BZ81 275 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 CYP3A43Q9HB55 503 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 UVRAGQ9P2Y5 699 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 FBXL5Q9UKA1 691 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 ATP8A1Q9Y2Q0 1164 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 NR2E3Q9Y5X4 410 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 DNM1LO00429 736 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 RAD51CO43502 376 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 CPP00450 1065 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 GPR15P49685 360 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 DEFB106AQ8N104 65 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 AENQ8WTP8 325 aaKnown RBP16.6■□□□□ 0.25
PDGFB-201ENST00000331163 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.251e-9■■■■□ 25.1
PDGFB-201ENST00000331163 NFKBIZQ9BYH8 718 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 WBP1LQ9NX94 342 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 CYTH4Q9UIA0 394 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 CDY1Q9Y6F8 540 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 TET1Q8NFU7 2136 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 HGSO14964 777 aaPredicted RBP16.6■□□□□ 0.25
PDGFB-201ENST00000331163 SNX16P57768 344 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 POU5F1BQ06416 359 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 NAA25Q14CX7 972 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 CCDC137Q6PK04 289 aaKnown RBP16.6■□□□□ 0.25
PDGFB-201ENST00000331163 SLC39A5Q6ZMH5 540 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 NAP1L3Q99457 506 aaPredicted RBP16.6■□□□□ 0.25
PDGFB-201ENST00000331163 ASNSD1Q9NWL6 643 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 RASAL2Q9UJF2 1139 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 GIT1Q9Y2X7 761 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 DAAM1Q9Y4D1 1078 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 ENPP3O14638 875 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 SLCO1A2P46721 670 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 RAB27AP51159 221 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 DR1Q01658 176 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 DARS2Q6PI48 645 aaKnown RBP16.6■□□□□ 0.25
PDGFB-201ENST00000331163 CREG2Q8IUH2 290 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 LINC01465Q8N7H1 131 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 ZNF473Q8WTR7 871 aaKnown RBP16.6■□□□□ 0.25
PDGFB-201ENST00000331163 STXBP5LQ9Y2K9 1186 aa16.6■□□□□ 0.25
PDGFB-201ENST00000331163 NRP1O14786 923 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 SLC4A1P02730 911 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 GLI1P08151 1106 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 BCAT1P54687 386 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 ZC3H12AQ5D1E8 599 aaKnown RBP16.59■□□□□ 0.25
PDGFB-201ENST00000331163 CASC4Q6P4E1 433 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 MFSD7Q6UXD7 560 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 PPP1R21Q6ZMI0 780 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 CCT8L2Q96SF2 557 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 OSBPL8Q9BZF1 889 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 ERVK-5Q9HDB9 667 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 PIH1D1Q9NWS0 290 aaKnown RBP16.59■□□□□ 0.25
PDGFB-201ENST00000331163 ITKQ08881 620 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDGFB-201ENST00000331163 RTN4RL1Q86UN2 441 aaPredicted RBP16.59■□□□□ 0.25
PDGFB-201ENST00000331163 PRM3Q9NNZ6 103 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 KLC4Q9NSK0 619 aa16.59■□□□□ 0.25
PDGFB-201ENST00000331163 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDGFB-201ENST00000331163 GNRH1P01148 92 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 GPD1P21695 349 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 NRLP54845 237 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 ADAM17P78536 824 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 DEUP1Q05D60 604 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 EFEMP1Q12805 493 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 CNGA2Q16280 664 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 ZNF677Q86XU0 584 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 USP33Q8TEY7 942 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 ISCUQ9H1K1 167 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 SFMBT1Q9UHJ3 866 aa16.58■□□□□ 0.25
PDGFB-201ENST00000331163 MSI1O43347 362 aaKnown RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 SHOX2O60902 331 aaPredicted RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 SKAP2O75563 359 aaPredicted RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 MMP8P22894 467 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 MIPP30301 263 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 BST2Q10589 180 aaKnown RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 DDX1Q92499 740 aaKnown RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 RAPGEF5Q92565 580 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 PBKQ96KB5 322 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 COLEC11Q9BWP8 271 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 GPR62Q9BZJ7 368 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 C11orf49Q9H6J7 331 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 SNX10Q9Y5X0 201 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 EIF4E1BA6NMX2 242 aaKnown RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 CD48P09326 243 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 CLTBP09497 229 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 TFE3P19532 575 aaPredicted RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 CLNS1AP54105 237 aaKnown RBP16.58■□□□□ 0.24
PDGFB-201ENST00000331163 DEFB103AP81534 67 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 IFT20Q8IY31 132 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 TTC9BQ8N6N2 239 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 BAIAP2L1Q9UHR4 511 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 NAALADL1Q9UQQ1 740 aa16.58■□□□□ 0.24
PDGFB-201ENST00000331163 GBP2P32456 591 aaPredicted RBP16.57■□□□□ 0.24
PDGFB-201ENST00000331163 C10orf120Q5SQS8 335 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 AGAP3Q96P47 875 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 CHST12Q9NRB3 414 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 HAUS2Q9NVX0 235 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms