RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 EBF4Q9BQW3 602 aa15.04■□□□□ -0
SNX20-202ENST00000330943 HERC5Q9UII4 1024 aaKnown RBP15.04■□□□□ -0
SNX20-202ENST00000330943 CNTN6Q9UQ52 1028 aa15.04■□□□□ -0
SNX20-202ENST00000330943 TEX264Q9Y6I9 313 aa15.04■□□□□ -0
SNX20-202ENST00000330943 IRF6O14896 467 aa15.03■□□□□ -0
SNX20-202ENST00000330943 ZNF862O60290 1169 aa15.03■□□□□ -0
SNX20-202ENST00000330943 STAM2O75886 525 aa15.03■□□□□ -0
SNX20-202ENST00000330943 RBP3P10745 1247 aa15.03■□□□□ -0
SNX20-202ENST00000330943 HARSP12081 509 aaKnown RBP15.03■□□□□ -0
SNX20-202ENST00000330943 SFNP31947 248 aa15.03■□□□□ -0
SNX20-202ENST00000330943 RFC1P35251 1148 aaPredicted RBP15.03■□□□□ -0
SNX20-202ENST00000330943 MRPS5P82675 430 aaKnown RBP15.03■□□□□ -0
SNX20-202ENST00000330943 SLC25A3Q00325 362 aa15.03■□□□□ -0
SNX20-202ENST00000330943 PDE1BQ01064 536 aa15.03■□□□□ -0
SNX20-202ENST00000330943 KRT76Q01546 638 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SLC25A11Q02978 314 aaKnown RBP15.03■□□□□ -0
SNX20-202ENST00000330943 LPCAT4Q643R3 524 aa15.03■□□□□ -0
SNX20-202ENST00000330943 DHDDSQ86SQ9 333 aa15.03■□□□□ -0
SNX20-202ENST00000330943 TMEM35BQ8NCS4 154 aa15.03■□□□□ -0
SNX20-202ENST00000330943 S100A14Q9HCY8 104 aa15.03■□□□□ -0
SNX20-202ENST00000330943 PPME1Q9Y570 386 aa15.03■□□□□ -0
SNX20-202ENST00000330943 COMMD3-BMI1R4GMX3 469 aa15.03■□□□□ -0
SNX20-202ENST00000330943 RGPD3A6NKT7 1758 aaPredicted RBP15.03■□□□□ -0
SNX20-202ENST00000330943 RGPD4Q7Z3J3 1758 aa15.03■□□□□ -0
SNX20-202ENST00000330943 MCF2LO15068 1137 aa15.03■□□□□ -0
SNX20-202ENST00000330943 CREB3O43889 395 aa15.03■□□□□ -0
SNX20-202ENST00000330943 LRCH4O75427 683 aa15.03■□□□□ -0
SNX20-202ENST00000330943 KRT37O76014 449 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SPATA31D3P0C874 917 aa15.03■□□□□ -0
SNX20-202ENST00000330943 KDELR1P24390 212 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SP4Q02446 784 aa15.03■□□□□ -0
SNX20-202ENST00000330943 ASPHQ12797 758 aa15.03■□□□□ -0
SNX20-202ENST00000330943 MED21Q13503 144 aa15.03■□□□□ -0
SNX20-202ENST00000330943 NCOA4Q13772 614 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SEZ6Q53EL9 994 aa15.03■□□□□ -0
SNX20-202ENST00000330943 TEX44Q53QW1 395 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SFT2D3Q587I9 215 aa15.03■□□□□ -0
SNX20-202ENST00000330943 ZCCHC23Q6ZST2 131 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SPATA31D4Q6ZUB0 917 aa15.03■□□□□ -0
SNX20-202ENST00000330943 POLNQ7Z5Q5 900 aa15.03■□□□□ -0
SNX20-202ENST00000330943 PDSS2Q86YH6 399 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SYTL5Q8TDW5 730 aaPredicted RBP15.03■□□□□ -0
SNX20-202ENST00000330943 FAM172AQ8WUF8 416 aa15.03■□□□□ -0
SNX20-202ENST00000330943 C20orf27Q9GZN8 174 aa15.03■□□□□ -0
SNX20-202ENST00000330943 POLR3FQ9H1D9 316 aaPredicted RBP15.03■□□□□ -0
SNX20-202ENST00000330943 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
SNX20-202ENST00000330943 XPNPEP1Q9NQW7 623 aa15.03■□□□□ -0
SNX20-202ENST00000330943 PCSK1NQ9UHG2 260 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SOX13Q9UN79 622 aa15.03■□□□□ -0
SNX20-202ENST00000330943 HBS1LQ9Y450 684 aaKnown RBP15.03■□□□□ -0
SNX20-202ENST00000330943 SCN9AQ15858 1988 aa15.03■□□□□ -0
SNX20-202ENST00000330943 A0A088AWK7 358 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
SNX20-202ENST00000330943 A6NJR5 290 aa15.03■□□□□ -0
SNX20-202ENST00000330943 YDJCA8MPS7 323 aa15.03■□□□□ -0
SNX20-202ENST00000330943 CXorf49A8MYA2 514 aaPredicted RBP15.03■□□□□ -0
SNX20-202ENST00000330943 SNRPAP09012 282 aaKnown RBP15.03■□□□□ -0
SNX20-202ENST00000330943 C6orf222P0C671 652 aaPredicted RBP15.03■□□□□ -0
SNX20-202ENST00000330943 SPDYE6P0CI01 402 aa15.03■□□□□ -0
SNX20-202ENST00000330943 PGM5Q15124 567 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
SNX20-202ENST00000330943 KYAT3Q6YP21 454 aaKnown RBP15.03■□□□□ -0
SNX20-202ENST00000330943 NIPA2Q8N8Q9 360 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SLC26A7Q8TE54 656 aa15.03■□□□□ -0
SNX20-202ENST00000330943 HAPLN3Q96S86 360 aa15.03■□□□□ -0
SNX20-202ENST00000330943 HAPLN2Q9GZV7 340 aa15.03■□□□□ -0
SNX20-202ENST00000330943 ARHGAP28Q9P2N2 729 aa15.03■□□□□ -0
SNX20-202ENST00000330943 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
SNX20-202ENST00000330943 KRT7P08729 469 aa15.02■□□□□ -0
SNX20-202ENST00000330943 CAP2P40123 477 aa15.02■□□□□ -0
SNX20-202ENST00000330943 ZNF132P52740 706 aa15.02■□□□□ -0
SNX20-202ENST00000330943 EPHB1P54762 984 aa15.02■□□□□ -0
SNX20-202ENST00000330943 TAP1Q03518 808 aa15.02■□□□□ -0
SNX20-202ENST00000330943 HNRNPDQ14103 355 aaKnown RBP15.02■□□□□ -0
SNX20-202ENST00000330943 EFHC1Q5JVL4 640 aa15.02■□□□□ -0
SNX20-202ENST00000330943 ARFGAP1Q8N6T3 406 aa15.02■□□□□ -0
SNX20-202ENST00000330943 POU5F2Q8N7G0 328 aa15.02■□□□□ -0
SNX20-202ENST00000330943 JOSD2Q8TAC2 188 aa15.02■□□□□ -0
SNX20-202ENST00000330943 SPATA18Q8TC71 538 aa15.02■□□□□ -0
SNX20-202ENST00000330943 CALN1Q9BXU9 219 aa15.02■□□□□ -0
SNX20-202ENST00000330943 FRMD8P1Q9BZ68 369 aaPredicted RBP15.02■□□□□ -0
SNX20-202ENST00000330943 IMPG2Q9BZV3 1241 aa15.02■□□□□ -0
SNX20-202ENST00000330943 SIRPGQ9P1W8 387 aa15.02■□□□□ -0
SNX20-202ENST00000330943 DNAH12Q6ZR08 3092 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 LSM8O95777 96 aaKnown RBP15.02□□□□□ -0.01
SNX20-202ENST00000330943 GRIA2P42262 883 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 AQP4P55087 323 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 LSAMPQ13449 338 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 TBCCQ15814 346 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 HADHQ16836 314 aaKnown RBP15.02□□□□□ -0.01
SNX20-202ENST00000330943 MCF2L2Q86YR7 1114 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 NME8Q8N427 588 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 KCTD6Q8NC69 237 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 NAT14Q8WUY8 206 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 CCDC124Q96CT7 223 aaKnown RBP15.02□□□□□ -0.01
SNX20-202ENST00000330943 TJP2Q9UDY2 1190 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 EFR3BQ9Y2G0 817 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 TTLL3Q9Y4R7 772 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 PCDHA10Q9Y5I2 948 aa15.02□□□□□ -0.01
SNX20-202ENST00000330943 TXNDC9O14530 226 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms