RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SLC8A2Q9UPR5 921 aa8.72□□□□□ -1.01
SKA2-201ENST00000330137 AP4S1Q9Y587 144 aa8.72□□□□□ -1.01
SKA2-201ENST00000330137 IKBKGQ9Y6K9 419 aa8.72□□□□□ -1.01
SKA2-201ENST00000330137 DYTNA2CJ06 578 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 SULT1C4O75897 302 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 INHBBP09529 407 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.01
SKA2-201ENST00000330137 CCDC130P13994 396 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 ENTPD1P49961 510 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.01
SKA2-201ENST00000330137 C21orf59P57076 290 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 KCTD21Q4G0X4 260 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 SMYD5Q6GMV2 418 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 CLEC4GQ6UXB4 293 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 LINC00299Q6ZSB3 139 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 ENOSF1Q7L5Y1 443 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 GPR180Q86V85 440 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 CATSPER3Q86XQ3 398 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 ZNF354CQ86Y25 554 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 COLGALT2Q8IYK4 626 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 PDPRQ8NCN5 879 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 PLEKHA8Q96JA3 519 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 PSD2Q9BQI7 771 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 RTKNQ9BST9 563 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 FRMD8Q9BZ67 464 aaPredicted RBP8.71□□□□□ -1.01
SKA2-201ENST00000330137 NACA2Q9H009 215 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 PNPLA3Q9NST1 481 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 SLC38A7Q9NVC3 462 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 GID8Q9NWU2 228 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 SEPT3Q9UH03 358 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 ANAPC7Q9UJX3 599 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 CCNL1Q9UK58 526 aaPredicted RBP8.71□□□□□ -1.01
SKA2-201ENST00000330137 SYNPO2Q9UMS6 1093 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 ARHGAP26Q9UNA1 814 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.01
SKA2-201ENST00000330137 PLLPQ9Y342 182 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.01
SKA2-201ENST00000330137 NAV1Q8NEY1 1877 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 FAM155AB1AL88 458 aaPredicted RBP8.71□□□□□ -1.02
SKA2-201ENST00000330137 COPEO14579 308 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 SLC22A2O15244 555 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 CLIC2O15247 247 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 ATMINO43313 823 aaPredicted RBP8.71□□□□□ -1.02
SKA2-201ENST00000330137 FBXO21O94952 628 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 PARNO95453 639 aaKnown RBP8.71□□□□□ -1.02
SKA2-201ENST00000330137 SNHG28P0DPA3 235 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 CYP2D6P10635 497 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 COL6A2P12110 1019 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 ATP6V1B1P15313 513 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 TNNI2P48788 182 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 ARSEP51690 589 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 PPP4CP60510 307 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 SPIRE1Q08AE8 756 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 AP3B2Q13367 1082 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 LRRC36Q1X8D7 754 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 TTC39BQ5VTQ0 682 aaPredicted RBP8.71□□□□□ -1.02
SKA2-201ENST00000330137 CYP2U1Q7Z449 544 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 CHERPQ8IWX8 916 aaKnown RBP8.71□□□□□ -1.02
SKA2-201ENST00000330137 OTUD5Q96G74 571 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 CCDC138Q96M89 665 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 FAM111AQ96PZ2 611 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 C10orf88Q9H8K7 445 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 AGPAT3Q9NRZ7 376 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 QPCTLQ9NXS2 382 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 RIMS3Q9UJD0 308 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 CCPG1Q9ULG6 757 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 APOBEC2Q9Y235 224 aaKnown RBP8.71□□□□□ -1.02
SKA2-201ENST00000330137 MYRFQ9Y2G1 1151 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 SCINQ9Y6U3 715 aa8.71□□□□□ -1.02
SKA2-201ENST00000330137 H3BNH8 94 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 GLRA2P23416 452 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 AQP5P55064 265 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 BST1Q10588 318 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 SPCS2Q15005 226 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 ANGEL2Q5VTE6 544 aaKnown RBP8.7□□□□□ -1.02
SKA2-201ENST00000330137 METTL21CQ5VZV1 264 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 ARID3BQ8IVW6 561 aaPredicted RBP8.7□□□□□ -1.02
SKA2-201ENST00000330137 SLC25A41Q8N5S1 370 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 PIGBQ92521 554 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 TTC17Q96AE7 1141 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 LBHD1Q9BQE6 289 aaPredicted RBP8.7□□□□□ -1.02
SKA2-201ENST00000330137 HEPHQ9BQS7 1158 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 GBA3Q9H227 469 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 MRPL47Q9HD33 250 aaKnown RBP8.7□□□□□ -1.02
SKA2-201ENST00000330137 SUGT1Q9Y2Z0 365 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 LOXHD1Q8IVV2 1947 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 A0A0B4J269 797 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 TRIM64A6NGJ6 449 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 KPNA4O00629 521 aaPredicted RBP8.7□□□□□ -1.02
SKA2-201ENST00000330137 KRT37O76014 449 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 SGPL1O95470 568 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 ALOX5P09917 674 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 C6orf222P0C671 652 aaPredicted RBP8.7□□□□□ -1.02
SKA2-201ENST00000330137 SPATA31C1P0DKV0 1188 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 CYP11B1P15538 503 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 PROZP22891 400 aa8.7□□□□□ -1.02
SKA2-201ENST00000330137 RFC4P35249 363 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms