RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 TNFSF13BQ9Y275 285 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 MROH7Q68CQ1 1323 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 CYP2F1P24903 491 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 BCAT1P54687 386 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 TAF5Q15542 800 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 MTHFD1LQ6UB35 978 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 KAT2BQ92831 832 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 NINJ2Q9NZG7 142 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 TUBGCP4Q9UGJ1 667 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 LOC100653049A0A140TA62 436 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 DCDC2CA8MYV0 355 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 TREHO43280 583 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 KRT34O76011 436 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 USP17L7P0C7H9 530 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 ZFXP17010 805 aaPredicted RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 BDNFP23560 247 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 ALDH18A1P54886 795 aaKnown RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 JAM2P57087 298 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 AFAP1L2Q8N4X5 818 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 LRRC57Q8N9N7 239 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 C3orf20Q8ND61 904 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 USP15Q9Y4E8 981 aaPredicted RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 RBAK-RBAKDNI3L0D1 243 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 HAUS5O94927 633 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 LSM8O95777 96 aaKnown RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 CYP1A2P05177 515 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 SOX11P35716 441 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 FCGRTP55899 365 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 NR1H3Q13133 447 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 PKN2Q16513 984 aaKnown RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 ATG16L1Q676U5 607 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 SLFN11Q7Z7L1 901 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 LRRC6Q86X45 466 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 EFHBQ8N7U6 833 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 C1orf127Q8N9H9 656 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 IFT43Q96FT9 208 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 SLC38A7Q9NVC3 462 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 KCNA3P22001 575 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 HOXD10P28358 340 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 NRLP54845 237 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 COPS2P61201 443 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 TAF1BQ53T94 588 aaPredicted RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 SDHAF4Q5VUM1 108 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 PAFAH2Q99487 392 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 ADAM2Q99965 735 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 XPNPEP3Q9NQH7 507 aa12.29□□□□□ -0.44
DDR1-223ENST00000324771 C20orf96Q9NUD7 363 aaPredicted RBP12.29□□□□□ -0.44
DDR1-223ENST00000324771 MYPNQ86TC9 1320 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 CNTNAP2Q9UHC6 1331 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 TYW5A2RUC4 315 aaKnown RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 C3orf70A6NLC5 250 aaPredicted RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 TSNAXIP1Q2TAA8 658 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 EML3Q32P44 896 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 ACCSLQ4AC99 568 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 TTC27Q6P3X3 843 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 SLC39A4Q6P5W5 647 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 FAM183BPQ6ZVS7 135 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 USP6NLQ92738 828 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 VPS39Q96JC1 886 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 SENP8Q96LD8 212 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 EIF2AQ9BY44 585 aaKnown RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 ACTR5Q9H9F9 607 aaPredicted RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 TXLNGQ9NUQ3 528 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 PSD3Q9NYI0 1048 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 WHRNQ9P202 907 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 IPO11Q9UI26 975 aaKnown RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 DDX3YO15523 660 aaKnown RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 ELNP15502 786 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 DNAJB2P25686 324 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 STIP1P31948 543 aaKnown RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 KCNT2Q6UVM3 1135 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 TRIM67Q6ZTA4 783 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 ARID3BQ8IVW6 561 aaPredicted RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 DTX3LQ8TDB6 740 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 TFB1MQ8WVM0 346 aaKnown RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 NMRK2Q9NPI5 230 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 ITGA11Q9UKX5 1188 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 MAFBQ9Y5Q3 323 aaPredicted RBP12.28□□□□□ -0.44
DDR1-223ENST00000324771 ZMYM2Q9UBW7 1377 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 MYH8P13535 1937 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 SH3BP5O60239 455 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 TSPAN3O60637 253 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 ARL2P36404 184 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 ACADSBP45954 432 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 AP1ARQ63HQ0 302 aa12.28□□□□□ -0.44
DDR1-223ENST00000324771 IQSEC1Q6DN90 963 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms