RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 POTEAQ6S8J7 498 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 GADL1Q6ZQY3 521 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 PTCD3Q96EY7 689 aaKnown RBP20.71■□□□□ 0.91
CRLF3-201ENST00000324238 E2F8A0AVK6 867 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 SIGLEC16A6NMB1 481 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 DLDP09622 509 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 SERPINB4P48594 390 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 XYLT1Q86Y38 959 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 TREML1Q86YW5 311 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 ARID3BQ8IVW6 561 aaPredicted RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 SRPK1Q96SB4 655 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 DLGAP2Q9P1A6 1054 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 M0QYV0 167 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 KCNN4O15554 427 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 CCDC22O60826 627 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 ATG7O95352 703 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 PRKCBP05771 671 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 APRTP07741 180 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 ZC3H12AQ5D1E8 599 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 TRNP1Q6NT89 227 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 WDR49Q8IV35 697 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 UNC5BQ8IZJ1 945 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 PDCD7Q8N8D1 485 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 CDHR1Q96JP9 859 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 DHRS4Q9BTZ2 278 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 IQCGQ9H095 443 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 PPARGC1AQ9UBK2 798 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 TOM1L1O75674 476 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 ARIH2O95376 493 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 KRT7P08729 469 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 HOXC6P09630 235 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 EIF4BP23588 611 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 RFC5P40937 340 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 CLCN3P51790 818 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 SLC18A1P54219 525 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 ZNF280AP59817 542 aaPredicted RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 FAM161BQ96MY7 647 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 MMP19Q99542 508 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 DDX50Q9BQ39 737 aaKnown RBP20.7■□□□□ 0.9
CRLF3-201ENST00000324238 C20orf27Q9GZN8 174 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 SMYD2Q9NRG4 433 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 MAD1L1Q9Y6D9 718 aa20.7■□□□□ 0.9
CRLF3-201ENST00000324238 B2RBV5 119 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 NVLO15381 856 aaKnown RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 LSM8O95777 96 aaKnown RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 NFICP08651 508 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 F7P08709 466 aaPredicted RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 ETV4P43268 484 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 CCNG1P51959 295 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 LAMTOR4Q0VGL1 99 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 HSF5Q4G112 596 aaPredicted RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 MROH9Q5TGP6 573 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 TRMT10BQ6PF06 316 aaKnown RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 MOB2Q70IA6 237 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 PCGF5Q86SE9 256 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 CCDC110Q8TBZ0 833 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 SCG3Q8WXD2 468 aaKnown RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 SHCBP1LQ9BZQ2 653 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 VPS11Q9H270 941 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 COPEO14579 308 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 ATP6V1C1P21283 382 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 GRIA1P42261 906 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 TMPRSS15P98073 1019 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 CDK16Q00536 496 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 ROR1Q01973 937 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 RASA2Q15283 850 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 WASHC2DQ5SRD0 308 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 RNF220Q5VTB9 566 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 ACO2Q99798 780 aaKnown RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 ELOVL4Q9GZR5 314 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 DCLRE1BQ9H816 532 aa20.69■□□□□ 0.9
CRLF3-201ENST00000324238 CORO1CQ9ULV4 474 aaPredicted RBP20.69■□□□□ 0.9
CRLF3-201ENST00000324238 PIGRP01833 764 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 ALDH18A1P54886 795 aaKnown RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 PRKD1Q15139 912 aaPredicted RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 C12orf29Q8N999 325 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 OXNAD1Q96HP4 312 aaPredicted RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 HEXIM2Q96MH2 286 aaKnown RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 ADPGKQ9BRR6 497 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 MRPL4Q9BYD3 311 aaKnown RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 MINDY3Q9H8M7 445 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 HOXC10Q9NYD6 342 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 MEI4A8MW99 385 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 RNF8O76064 485 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 FARP2O94887 1054 aaPredicted RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 RBL1P28749 1068 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 YWHAEP62258 255 aaKnown RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 BST1Q10588 318 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 PPP6R3Q5H9R7 873 aaPredicted RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 CDCA2Q69YH5 1023 aaPredicted RBP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 PHC3Q8NDX5 983 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 KLRG1Q96E93 195 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 PCMTD2Q9NV79 361 aa20.68■□□□□ 0.9
CRLF3-201ENST00000324238 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.68■□□□□ 0.9
CRLF3-201ENST00000324238 IQANK1A0A1B0GTG1 560 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 A6NHS1 94 aa20.67■□□□□ 0.9
CRLF3-201ENST00000324238 NOP56O00567 594 aaKnown RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 TRUB2O95900 331 aaKnown RBP20.67■□□□□ 0.9
CRLF3-201ENST00000324238 ITGB3P05106 788 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms