RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 EXT2Q93063 718 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TIPINQ9BVW5 301 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 OSBPL6Q9BZF3 934 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RPS6KL1Q9Y6S9 549 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 CNTNAP5Q8WYK1 1306 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ABHD2P08910 425 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SPRP35270 261 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 CLCN2P51788 898 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 IMPG1Q17R60 797 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TNS3Q68CZ2 1445 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 MSTO1Q9BUK6 570 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 THAP2Q9H0W7 228 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RSAD1Q9HA92 442 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 KLHL11Q9NVR0 708 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ARHGAP20Q9P2F6 1191 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SYNJ2BP-COX16A0A087WUM0 186 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 FAM237AA0A1B0GTK4 181 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC162PA2VCL2 907 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 MYMKA6NI61 221 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CCNB1P14635 433 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CCNA2P20248 432 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 GALK1P51570 392 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PSMC6P62333 389 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 TFDP1Q14186 410 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PACS1Q6VY07 963 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 KRT73Q86Y46 540 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 TMEM139Q8IV31 216 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 TTC39CQ8N584 583 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 DCAF4Q8WV16 495 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 HEXIM2Q96MH2 286 aaKnown RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CHID1Q9BWS9 393 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 COX16Q9P0S2 106 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CEP290O15078 2479 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CYP2D7A0A087X1C5 515 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 GAS2O43903 313 aaKnown RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 KATNA1O75449 491 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 BGNP21810 368 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 FASP25445 335 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ANGPT1Q15389 498 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 BHLHE22Q8NFJ8 381 aaPredicted RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ENKURQ8TC29 256 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ATP8B4Q8TF62 1192 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 AGXT2Q9BYV1 514 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 MAF1Q9H063 256 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 RNPEPQ9H4A4 650 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 INTS13Q9NVM9 706 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ARMCX1Q9P291 453 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC182A6NF36 153 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CYP26A1O43174 497 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 KRT36O76013 467 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 BNC1Q01954 994 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 TP53BP2Q13625 1128 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 C6orf183Q5T699 404 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 FAM160B1Q5W0V3 765 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 IQCKQ8N0W5 287 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC33Q8N5R6 958 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PDPRQ8NCN5 879 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 RORBQ92753 470 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 HPS1Q92902 700 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PIH1D3Q9NQM4 214 aaKnown RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 SLC5A4Q9NY91 659 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 TFCP2L1Q9NZI6 479 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 FADS3Q9Y5Q0 445 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF804BA4D1E1 1349 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 GLRA3O75311 464 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PGM3O95394 542 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CCND2P30279 289 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 BTDP43251 543 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 MROH9Q5TGP6 573 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 HDDC2Q7Z4H3 204 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 NT5DC3Q86UY8 548 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 MLPHQ9BV36 600 aaPredicted RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 BFARQ9NZS9 450 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PCDHGA4Q9Y5G9 962 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 HEATR5BQ9P2D3 2071 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 HEATR9A2RTY3 570 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF268Q14587 947 aaPredicted RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 NRF1Q16656 503 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 C4orf50Q6ZRC1 276 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 IQCF2Q8IXL9 164 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 HACE1Q8IYU2 909 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ZCWPW1Q9H0M4 648 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 VTI1BQ9UEU0 232 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 SLC13A4Q9UKG4 626 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 NAA20P61599 178 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 SH3D19Q5HYK7 790 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PDZK1Q5T2W1 519 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 TRIQKQ629K1 86 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CPA5Q8WXQ8 436 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 COA7Q96BR5 231 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 TASP1Q9H6P5 420 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CACNA2D2Q9NY47 1150 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC59Q9P031 241 aaKnown RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 ADAM30Q9UKF2 790 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 DDHD2O94830 711 aa7.29□□□□□ -1.24
SMC1A-201ENST00000322213 PKN2Q16513 984 aaKnown RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 SAMD4BQ5PRF9 694 aaKnown RBP7.29□□□□□ -1.24
SMC1A-201ENST00000322213 BROXQ5VW32 411 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms