RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PDZD7Q9H5P4 517 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 PRMT7Q9NVM4 692 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 C22orf31O95567 290 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 HMGCRP04035 888 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 YARSP54577 528 aaKnown RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 TMEM62Q0P6H9 643 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 FYB2Q5VWT5 728 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 CCDC62Q6P9F0 684 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 ILDR2Q71H61 639 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 ACOT1Q86TX2 421 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 PRPF39Q86UA1 669 aaKnown RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 DCPSQ96C86 337 aaKnown RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 SERAC1Q96JX3 654 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 TRIM56Q9BRZ2 755 aaKnown RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 CNPY3Q9BT09 278 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 B3GNT5Q9BYG0 378 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 ERAP1Q9NZ08 941 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 ZMYND8Q9ULU4 1186 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 APRTP07741 180 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 PYGBP11216 843 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 VDRP11473 427 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 CCNB1P14635 433 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 AMHR2Q16671 573 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 CCDC125Q86Z20 511 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 C10orf82Q8WW14 230 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 KIF12Q96FN5 646 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 MAGEB5Q9BZ81 275 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 MANSC1Q9H8J5 431 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 DPP3Q9NY33 737 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 C2orf71A6NGG8 1288 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 NDC80O14777 642 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 P4HA1P13674 534 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 RBL1P28749 1068 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 ZNF200P98182 395 aaPredicted RBP18.16■□□□□ 0.5
COL9A1-201ENST00000320755 TTLL4Q14679 1199 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 C7orf31Q8N865 590 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 CXorf56Q9H5V9 222 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 ZFP69BQ9UJL9 534 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 PPP2R3BQ9Y5P8 575 aa18.16■□□□□ 0.5
COL9A1-201ENST00000320755 DCTN3O75935 186 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 BCAR1P56945 870 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 TAZQ16635 292 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 CA9Q16790 459 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 GOLGA7BQ2TAP0 167 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 BANPQ8N9N5 519 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 LBHD1Q9BQE6 289 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-201ENST00000320755 BARX2Q9UMQ3 279 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-201ENST00000320755 SNX9Q9Y5X1 595 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 C2CD4BA6NLJ0 364 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 EPHB2P29323 1055 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 ELF1P32519 619 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 PMF1Q6P1K2 205 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 GPC2Q8N158 579 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 CCDC110Q8TBZ0 833 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 NR2E3Q9Y5X4 410 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 NUMBLQ9Y6R0 609 aa18.15■□□□□ 0.5
COL9A1-201ENST00000320755 E7ESA3 106 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 CDC25CP30307 473 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 STIP1P31948 543 aaKnown RBP18.14■□□□□ 0.5
COL9A1-201ENST00000320755 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.5
COL9A1-201ENST00000320755 NOMO1Q15155 1222 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 SMAD1Q15797 465 aaKnown RBP18.14■□□□□ 0.5
COL9A1-201ENST00000320755 PPP1R26Q5T8A7 1209 aaPredicted RBP18.14■□□□□ 0.5
COL9A1-201ENST00000320755 LONP2Q86WA8 852 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 PLD5Q8N7P1 536 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 FAM172AQ8WUF8 416 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 RNF157Q96PX1 679 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 NT5C1AQ9BXI3 368 aa18.14■□□□□ 0.5
COL9A1-201ENST00000320755 CFAP69A5D8W1 941 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 HCRTO43612 131 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 SLC25A27O95847 323 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 ZBED1O96006 694 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 T-ENOLP0DO92 83 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 TROVE2P10155 538 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 SLC18A1P54219 525 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 CCDC15Q0P6D6 951 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 TFDP2Q14188 446 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 CYP4V2Q6ZWL3 525 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 CXorf38Q8TB03 319 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 MZB1Q8WU39 189 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 AFG1LQ8WV93 481 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 ACAP3Q96P50 834 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 NOP53Q9NZM5 478 aaKnown RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 A0A0G2JLL6 359 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 PPEF2O14830 753 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 TFE3P19532 575 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 BGNP21810 368 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 IREB2P48200 963 aaKnown RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 CLNS1AP54105 237 aaKnown RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 ATXN1P54253 815 aaKnown RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 ZBTB16Q05516 673 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 CCDC14Q49A88 953 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 GLRA4Q5JXX5 417 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 RGS9BPQ6ZS82 235 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 PRRT2Q7Z6L0 340 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 AGGF1Q8N302 714 aaeCLIP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 NETO2Q8NC67 525 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 L3MBTL3Q96JM7 780 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 RAB3IPQ96QF0 476 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 TBC1D10AQ9BXI6 508 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms