RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 AGGF1Q8N302 714 aaeCLIP21.53■■□□□ 1.04
TTC39C-202ENST00000317571 SLC35F5Q8WV83 523 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 SLC4A5Q9BY07 1137 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 XPO7Q9UIA9 1087 aaKnown RBP21.53■■□□□ 1.04
TTC39C-202ENST00000317571 BASP1P80723 227 aaKnown RBP21.53■■□□□ 1.04
TTC39C-202ENST00000317571 FAM133BQ5BKY9 247 aaKnown RBP21.53■■□□□ 1.04
TTC39C-202ENST00000317571 PLD5Q8N7P1 536 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 CLEC4CQ8WTT0 213 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 PYROXD1Q8WU10 500 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 LENG1Q96BZ8 264 aaPredicted RBP21.53■■□□□ 1.04
TTC39C-202ENST00000317571 RMDN2Q96LZ7 410 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 RNF157Q96PX1 679 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 TINF2Q9BSI4 451 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 MAGEB5Q9BZ81 275 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 KIAA1257Q9ULG3 409 aa21.53■■□□□ 1.04
TTC39C-202ENST00000317571 PRPF4O43172 522 aaKnown RBP eCLIP21.52■■□□□ 1.04
TTC39C-202ENST00000317571 DNAJC8O75937 253 aaPredicted RBP21.52■■□□□ 1.04
TTC39C-202ENST00000317571 UBOX5O94941 541 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 FGFR1P11362 822 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 KRT15P19012 456 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 RPA3P35244 121 aaPredicted RBP21.52■■□□□ 1.04
TTC39C-202ENST00000317571 SLC1A5Q15758 541 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 DCAF4L1Q3SXM0 396 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 PRAMEF19Q5SWL8 479 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 PPP1R21Q6ZMI0 780 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 SPATA21Q7Z572 469 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 FUKQ8N0W3 1084 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 ANKLE1Q8NAG6 615 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 MZB1Q8WU39 189 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 FAM172AQ8WUF8 416 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 DHRS4Q9BTZ2 278 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 USP29Q9HBJ7 922 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 CD248Q9HCU0 757 aa21.52■■□□□ 1.04
TTC39C-202ENST00000317571 NGRNQ9NPE2 291 aaKnown RBP21.52■■□□□ 1.04
TTC39C-202ENST00000317571 PDCD11Q14690 1871 aaKnown RBP21.52■■□□□ 1.04
TTC39C-202ENST00000317571 DPYSL4O14531 572 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 TYROBPO43914 113 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 ROR1Q01973 937 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 XRCC4Q13426 336 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 DGKDQ16760 1214 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 SOWAHAQ2M3V2 549 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 BBS9Q3SYG4 887 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 FAM47EQ6ZV65 393 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 FBF1Q8TES7 1133 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 SGSM3Q96HU1 749 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 PTPN18Q99952 460 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 PAIP2Q9BPZ3 127 aaKnown RBP21.51■■□□□ 1.03
TTC39C-202ENST00000317571 PHACTR1Q9C0D0 580 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 PSMC3IPQ9P2W1 217 aaPredicted RBP21.51■■□□□ 1.03
TTC39C-202ENST00000317571 SLC24A2Q9UI40 661 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 PRPSAP2O60256 369 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 ATXN1P54253 815 aaKnown RBP21.51■■□□□ 1.03
TTC39C-202ENST00000317571 SCYL2Q6P3W7 929 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 SLC27A1Q6PCB7 646 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 DARS2Q6PI48 645 aaKnown RBP21.51■■□□□ 1.03
TTC39C-202ENST00000317571 C3orf62Q6ZUJ4 267 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 CATSPER4Q7RTX7 472 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 TMEM110Q86TL2 294 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 PLCD3Q8N3E9 789 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 TMEM40Q8WWA1 233 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 SNRNP25Q9BV90 132 aaKnown RBP21.51■■□□□ 1.03
TTC39C-202ENST00000317571 SLC45A1Q9Y2W3 748 aa21.51■■□□□ 1.03
TTC39C-202ENST00000317571 DOCK3Q8IZD9 2030 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 AKAP5P24588 427 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 HDAC4P56524 1084 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 GEMIN4P57678 1058 aaKnown RBP21.5■■□□□ 1.03
TTC39C-202ENST00000317571 SLC6A3Q01959 620 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 NR1H3Q13133 447 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 KCNJ11Q14654 390 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 RASA2Q15283 850 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 ALKAL1Q6UXT8 129 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 ATP11CQ8NB49 1132 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 PCDH19Q8TAB3 1148 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 MIS12Q9H081 205 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 ACSS3Q9H6R3 686 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 PCDH18Q9HCL0 1135 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 CHMP2BQ9UQN3 213 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 SPTLC1O15269 473 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 RECQL4O94761 1208 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 GCLCP48506 637 aaPredicted RBP21.5■■□□□ 1.03
TTC39C-202ENST00000317571 MTFR1Q15390 333 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 ZNF618Q5T7W0 954 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 KBTBD7Q8WVZ9 684 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 PAFAH2Q99487 392 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 ABHD16BQ9H3Z7 469 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 FAM124BQ9H5Z6 455 aaPredicted RBP21.5■■□□□ 1.03
TTC39C-202ENST00000317571 PLEKHA5Q9HAU0 1116 aa21.5■■□□□ 1.03
TTC39C-202ENST00000317571 TRIP12Q14669 1992 aaPredicted RBP21.5■■□□□ 1.03
TTC39C-202ENST00000317571 AVILO75366 819 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 SMIM10L2AP0DMW4 78 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 SMIM10L2BP0DMW5 78 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 GALNTL6Q49A17 601 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 C9orf57Q5W0N0 161 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 DCAKDQ8WVC6 231 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 APOL6Q9BWW8 343 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 SLCO1B3Q9NPD5 702 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 GLTPD2A6NH11 291 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 NDC80O14777 642 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 CCDC130P13994 396 aa21.49■■□□□ 1.03
TTC39C-202ENST00000317571 ELK3P41970 407 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms