RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SELPP16109 830 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 PSMA2P25787 234 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 CD52P31358 61 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 VCPP55072 806 aaKnown RBP14.85□□□□□ -0.03
VRK3-201ENST00000316763 RBP5P82980 135 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 OGDHQ02218 1023 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 DSC3Q14574 896 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 ITIH4Q14624 930 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 CYP4A22Q5TCH4 519 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 DENND1BQ6P3S1 775 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 LRRC8DQ7L1W4 858 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 TAX1BP1Q86VP1 789 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 LRRC34Q8IZ02 419 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 CNPY4Q8N129 248 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 BCO2Q9BYV7 579 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 PPP1R12CQ9BZL4 782 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 KDM4CQ9H3R0 1056 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 KCNK9Q9NPC2 374 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 FAM105AQ9NUU6 356 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 TPX2Q9ULW0 747 aaKnown RBP14.85□□□□□ -0.03
VRK3-201ENST00000316763 POLIQ9UNA4 740 aa14.85□□□□□ -0.03
VRK3-201ENST00000316763 SMIM28A0A1B0GU29 152 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 TRIM43BA6NCK2 446 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 ITGAVP06756 1048 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 TCF4P15884 667 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 CYP2C18P33260 490 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 CDKN2BP42772 138 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 ARSEP51690 589 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 MORF4L2Q15014 288 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 LACTB2Q53H82 288 aaPredicted RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 PIGWQ7Z7B1 504 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 TTC13Q8NBP0 860 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 FNIP1Q8TF40 1166 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 NKD2Q969F2 451 aaPredicted RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 TRIM43Q96BQ3 446 aaPredicted RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 APOL6Q9BWW8 343 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 SYNCQ9H7C4 482 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 PRDM5Q9NQX1 630 aaPredicted RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 ACTL7BQ9Y614 415 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 RALGAPA2Q2PPJ7 1873 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 CITO14578 2027 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 TMEM120BA0PK00 339 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 GOLGA8SH3BPF8 625 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 IFNAR2P48551 515 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 CCL23P55773 120 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 PSMC1P62191 440 aaKnown RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 PLCB3Q01970 1234 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 GPS1Q13098 491 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 NR1H3Q13133 447 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 ZNF268Q14587 947 aaPredicted RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 MBTPS1Q14703 1052 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 WDR72Q3MJ13 1102 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 MRPL10Q7Z7H8 261 aaKnown RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 PCGF5Q86SE9 256 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 BEST2Q8NFU1 509 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 C9orf72Q96LT7 481 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 HTATIP2Q9BUP3 242 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 CYP3A43Q9HB55 503 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 SAYSD1Q9NPB0 183 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 TMEM51Q9NW97 253 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 UBQLN1Q9UMX0 589 aaKnown RBP14.84□□□□□ -0.03
VRK3-201ENST00000316763 AGAP1Q9UPQ3 857 aa14.84□□□□□ -0.03
VRK3-201ENST00000316763 TANC1Q9C0D5 1861 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 KIAA0355O15063 1070 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 MGEA5O60502 916 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 ZNF623O75123 536 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 ITGB8P26012 769 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 GSCP56915 257 aaPredicted RBP14.83□□□□□ -0.04
VRK3-201ENST00000316763 GPNMBQ14956 572 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 PTPN20Q4JDL3 420 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 ANKRD20A8PQ5CZ79 823 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 GLRA4Q5JXX5 417 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 CCDC13Q8IYE1 715 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 C18orf25Q96B23 403 aaPredicted RBP14.83□□□□□ -0.04
VRK3-201ENST00000316763 SCLYQ96I15 445 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 HPDLQ96IR7 371 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 PWWP2AQ96N64 755 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 PCDH9Q9HC56 1237 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 NKIRAS1Q9NYS0 192 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 KLK14Q9P0G3 267 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 PCDH10Q9P2E7 1040 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 TUBGCP4Q9UGJ1 667 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 TET1Q8NFU7 2136 aa14.83□□□□□ -0.04
VRK3-201ENST00000316763 CCT8L1PA6NM43 557 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 SGK1O00141 431 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 BRAFP15056 766 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 CYP3A5P20815 502 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 RFC1P35251 1148 aaPredicted RBP14.82□□□□□ -0.04
VRK3-201ENST00000316763 RAP1GAPP47736 663 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 RAB27AP51159 221 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 RAD23BP54727 409 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 ACAP1Q15027 740 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 OASLQ15646 514 aaKnown RBP14.82□□□□□ -0.04
VRK3-201ENST00000316763 VSTM1Q6UX27 236 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 ARHGEF18Q6ZSZ5 1173 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 HACE1Q8IYU2 909 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 C7orf61Q8IZ16 206 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 ELAC2Q9BQ52 826 aaKnown RBP14.82□□□□□ -0.04
VRK3-201ENST00000316763 PPCSQ9HAB8 311 aa14.82□□□□□ -0.04
VRK3-201ENST00000316763 SHOC2Q9UQ13 582 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms