RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 RFX6Q8HWS3 928 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 EMC1Q8N766 993 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 RBM15BQ8NDT2 890 aaKnown RBP14.01□□□□□ -0.17
SKA3-202ENST00000314759 PCDHGC3Q9UN70 934 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 CTDP1Q9Y5B0 961 aaPredicted RBP14.01□□□□□ -0.17
SKA3-202ENST00000314759 APOC4-APOC2K7ER74 178 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 COPEO14579 308 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 MAGEC1O60732 1142 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 ATG7O95352 703 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 APOC2P02655 101 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 C1QAP02745 245 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 SPATA31D3P0C874 917 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 NAMPTP43490 491 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 MAP3K10Q02779 954 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 USP4Q13107 963 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 ZRSR2Q15696 482 aaKnown RBP14.01□□□□□ -0.17
SKA3-202ENST00000314759 HADHQ16836 314 aaKnown RBP14.01□□□□□ -0.17
SKA3-202ENST00000314759 SPATA31D4Q6ZUB0 917 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 TMPRSS6Q8IU80 811 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 ARHGAP24Q8N264 748 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 KCTD6Q8NC69 237 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 CCDC110Q8TBZ0 833 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 SPATA18Q8TC71 538 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 ZNF395Q9H8N7 513 aaPredicted RBP14.01□□□□□ -0.17
SKA3-202ENST00000314759 KCNK4Q9NYG8 393 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 PDP2Q9P2J9 529 aa14.01□□□□□ -0.17
SKA3-202ENST00000314759 TRIM49D1C9J1S8 452 aa14□□□□□ -0.17
SKA3-202ENST00000314759 USP1O94782 785 aa14□□□□□ -0.17
SKA3-202ENST00000314759 MDH1BQ5I0G3 518 aa14□□□□□ -0.17
SKA3-202ENST00000314759 FKBP1CQ5VVH2 108 aa14□□□□□ -0.17
SKA3-202ENST00000314759 ZNF526Q8TF50 670 aaPredicted RBP14□□□□□ -0.17
SKA3-202ENST00000314759 KCNN1Q92952 543 aa14□□□□□ -0.17
SKA3-202ENST00000314759 NDNQ99608 321 aa14□□□□□ -0.17
SKA3-202ENST00000314759 NIF3L1Q9GZT8 377 aa14□□□□□ -0.17
SKA3-202ENST00000314759 ASCC2Q9H1I8 757 aaPredicted RBP14□□□□□ -0.17
SKA3-202ENST00000314759 RNF146Q9NTX7 359 aa14□□□□□ -0.17
SKA3-202ENST00000314759 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
SKA3-202ENST00000314759 F8W8V4 182 aa14□□□□□ -0.17
SKA3-202ENST00000314759 MCF2LO15068 1137 aa14□□□□□ -0.17
SKA3-202ENST00000314759 ARL2P36404 184 aa14□□□□□ -0.17
SKA3-202ENST00000314759 BST1Q10588 318 aa14□□□□□ -0.17
SKA3-202ENST00000314759 NPNTQ6UXI9 565 aa14□□□□□ -0.17
SKA3-202ENST00000314759 SCARA5Q6ZMJ2 495 aa14□□□□□ -0.17
SKA3-202ENST00000314759 FAM83AQ86UY5 434 aa14□□□□□ -0.17
SKA3-202ENST00000314759 SLC26A11Q86WA9 606 aa14□□□□□ -0.17
SKA3-202ENST00000314759 FAM81AQ8TBF8 368 aa14□□□□□ -0.17
SKA3-202ENST00000314759 ITFG2Q969R8 447 aa14□□□□□ -0.17
SKA3-202ENST00000314759 SPATA16Q9BXB7 569 aa14□□□□□ -0.17
SKA3-202ENST00000314759 FAM192AQ9GZU8 254 aa14□□□□□ -0.17
SKA3-202ENST00000314759 IQCGQ9H095 443 aaKnown RBP14□□□□□ -0.17
SKA3-202ENST00000314759 DHX33Q9H6R0 707 aaKnown RBP14□□□□□ -0.17
SKA3-202ENST00000314759 DMAP1Q9NPF5 467 aaPredicted RBP14□□□□□ -0.17
SKA3-202ENST00000314759 DDX43Q9NXZ2 648 aaKnown RBP14□□□□□ -0.17
SKA3-202ENST00000314759 LMCD1Q9NZU5 365 aa14□□□□□ -0.17
SKA3-202ENST00000314759 PPARGC1AQ9UBK2 798 aaKnown RBP14□□□□□ -0.17
SKA3-202ENST00000314759 G3BP2Q9UN86 482 aaKnown RBP14□□□□□ -0.17
SKA3-202ENST00000314759 PLA2G4CQ9UP65 541 aa14□□□□□ -0.17
SKA3-202ENST00000314759 CXorf49A8MYA2 514 aaPredicted RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 VWA5AO00534 786 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 MRPS5P82675 430 aaKnown RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 KCNJ11Q14654 390 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 ARID3BQ8IVW6 561 aaPredicted RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 PPM1NQ8N819 430 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 CMASQ8NFW8 434 aaPredicted RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 SHKBP1Q8TBC3 707 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 HSPH1Q92598 858 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 C7orf26Q96N11 449 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 PANX3Q96QZ0 392 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 CALN1Q9BXU9 219 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 PLLPQ9Y342 182 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 KAT6AQ92794 2004 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 ANPEPP15144 967 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 HIRAP54198 1017 aaPredicted RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 PSMC1P62191 440 aaKnown RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 KDSRQ06136 332 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 DYNC1I2Q13409 638 aaKnown RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 TTC39BQ5VTQ0 682 aaPredicted RBP13.99□□□□□ -0.17
SKA3-202ENST00000314759 RIPOR1Q6ZS17 1223 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 WDR49Q8IV35 697 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 BRSK2Q8IWQ3 736 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 SCUBE1Q8IWY4 988 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 CTAGE3PQ8IX95 158 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 FNIP1Q8TF40 1166 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 ATG4CQ96DT6 458 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 CFAP36Q96G28 342 aa13.99□□□□□ -0.17
SKA3-202ENST00000314759 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 I3L4J1 428 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 CYB561D2O14569 222 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 FAM189A1O60320 539 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 RNASEH1O60930 286 aaKnown RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 SUPT20HL2P0C7V6 817 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 MIPP30301 263 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 TMPRSS15P98073 1019 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 MMRN1Q13201 1228 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 SUPT20HL1Q3ZLR7 823 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 LRRC23Q53EV4 343 aaPredicted RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 DARS2Q6PI48 645 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms