RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 KCNA5P22460 613 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 CCR2P41597 374 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 RNASE9P60153 205 aaKnown RBP19.12■□□□□ 0.65
HMGA1-201ENST00000311487 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
HMGA1-201ENST00000311487 VEPH1Q14D04 833 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 CTC1Q2NKJ3 1217 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 ACAD10Q6JQN1 1059 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 ACRBPQ8NEB7 543 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 PSMG2Q969U7 264 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 TCEAL4Q96EI5 215 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 SLC4A5Q9BY07 1137 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 PRKD2Q9BZL6 878 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 A0A0U1RQJ8 604 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 PAPSS1O43252 624 aaPredicted RBP19.11■□□□□ 0.65
HMGA1-201ENST00000311487 LSM8O95777 96 aaKnown RBP19.11■□□□□ 0.65
HMGA1-201ENST00000311487 SP100P23497 879 aaPredicted RBP19.11■□□□□ 0.65
HMGA1-201ENST00000311487 CDH5P33151 784 aaPredicted RBP19.11■□□□□ 0.65
HMGA1-201ENST00000311487 SLC18A3Q16572 532 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 OR6B2Q6IFH4 312 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 TOGARAM2Q6ZUX3 1019 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 HFE2Q6ZVN8 426 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 FAM183BPQ6ZVS7 135 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 TMTC1Q8IUR5 882 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 ELMOD1Q8N336 334 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 ATRIPQ8WXE1 791 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 SPATA17Q96L03 361 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 ADAM22Q9P0K1 906 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 GMIPQ9P107 970 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 HSFX1Q9UBD0 423 aa19.11■□□□□ 0.65
HMGA1-201ENST00000311487 UQCRHLA0A096LP55 91 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 SSU72P8A0A1W2PR75 194 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 YJEFN3A6XGL0 299 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 E7ENQ6 273 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 UQCRHP07919 91 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 YWHAQP27348 245 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 CDK17Q00537 523 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 CENPCQ03188 943 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 SLC5A9Q2M3M2 681 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 RAB41Q5JT25 222 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 STXBP5Q5T5C0 1151 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 ING5Q8WYH8 240 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 FBXO32Q969P5 355 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 SFXN1Q9H9B4 322 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 MYO1AQ9UBC5 1043 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 A0A1W2PRU2 124 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 ZBED1O96006 694 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 RHOP08100 348 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 MMP8P22894 467 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 TMEM184AQ6ZMB5 413 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 TRIM72Q6ZMU5 477 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 TMEM110Q86TL2 294 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 MYRIPQ8NFW9 859 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 KCTD13Q8WZ19 329 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 EDEM1Q92611 657 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 C18orf8Q96DM3 657 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 PABPC5Q96DU9 382 aaKnown RBP19.1■□□□□ 0.65
HMGA1-201ENST00000311487 NOX5Q96PH1 765 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 THAP2Q9H0W7 228 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 OSER1Q9NX31 292 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 MAFFQ9ULX9 164 aa19.1■□□□□ 0.65
HMGA1-201ENST00000311487 EPN1Q9Y6I3 576 aaPredicted RBP19.1■□□□□ 0.65
HMGA1-201ENST00000311487 A0A1W2PQH9 124 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 NDUFA10O95299 355 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 CSH1P0DML2 217 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 CSH2P0DML3 217 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 RRM1P23921 792 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 GABRR2P28476 465 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 CYP4F8P98187 520 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 PTP4A2Q12974 167 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 GAREM2Q75VX8 874 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 MON1BQ7L1V2 547 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 TMEM150AQ86TG1 271 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 XYLT1Q86Y38 959 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 MCOLN2Q8IZK6 566 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 TTC16Q8NEE8 873 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 NMUR1Q9HB89 426 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 ZDHHC7Q9NXF8 308 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 DPP7Q9UHL4 492 aa19.09■□□□□ 0.65
HMGA1-201ENST00000311487 GREB1Q4ZG55 1949 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 ARHGAP6O43182 974 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 XYLBO75191 536 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 RTN2O75298 545 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 SRGAP2BP0DMP2 458 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 FECHP22830 423 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 TFF2Q03403 129 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 CBX2Q14781 532 aaPredicted RBP19.08■□□□□ 0.65
HMGA1-201ENST00000311487 TMC8Q8IU68 726 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 IPO4Q8TEX9 1081 aaKnown RBP19.08■□□□□ 0.65
HMGA1-201ENST00000311487 FAM149B1Q96BN6 582 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 HSFY1Q96LI6 401 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 LRRC3Q9BY71 257 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 ASAH2Q9NR71 780 aa19.08■□□□□ 0.65
HMGA1-201ENST00000311487 ZNF638Q14966 1978 aaKnown RBP19.08■□□□□ 0.64
HMGA1-201ENST00000311487 C2orf16Q68DN1 1984 aa19.08■□□□□ 0.64
HMGA1-201ENST00000311487 TBX18O95935 607 aa19.08■□□□□ 0.64
HMGA1-201ENST00000311487 HNRNPA1P09651 372 aaKnown RBP eCLIP19.08■□□□□ 0.64
HMGA1-201ENST00000311487 PTPN2P17706 415 aa19.08■□□□□ 0.64
HMGA1-201ENST00000311487 GALCP54803 685 aa19.08■□□□□ 0.64
HMGA1-201ENST00000311487 PABPC1LQ4VXU2 614 aaKnown RBP19.08■□□□□ 0.64
HMGA1-201ENST00000311487 ITIH5Q86UX2 942 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms