RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 TMEM92Q6UXU6 159 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 RASSF3Q86WH2 238 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 C12orf40Q86WS4 652 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 ADGRG2Q8IZP9 1017 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 XXYLT1Q8NBI6 393 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 B3GALNT2Q8NCR0 500 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 MDGA1Q8NFP4 955 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 FOXD4L4Q8WXT5 416 aaPredicted RBP12.96□□□□□ -0.33
TPT1-201ENST00000309246 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
TPT1-201ENST00000309246 SLITRK1Q96PX8 696 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 C7orf25Q9BPX7 421 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 BLZF1Q9H2G9 400 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 ZDHHC4Q9NPG8 344 aa12.96□□□□□ -0.33
TPT1-201ENST00000309246 LNP1A1A4G5 178 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 C4orf47A7E2U8 309 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 PATE3B3GLJ2 98 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 K7ELQ4 463 aaPredicted RBP12.95□□□□□ -0.34
TPT1-201ENST00000309246 CUTAO60888 179 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 CLSTN1O94985 981 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
TPT1-201ENST00000309246 YWHAQP27348 245 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 CASP4P49662 377 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 MRPS21P82921 87 aaKnown RBP12.95□□□□□ -0.34
TPT1-201ENST00000309246 EHHADHQ08426 723 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 PSAPL1Q6NUJ1 521 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 CNNM4Q6P4Q7 775 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 RHBDF2Q6PJF5 856 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 UNC13DQ70J99 1090 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 CYP2U1Q7Z449 544 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 ALLCQ8N6M5 410 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 IQUBQ8NA54 791 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 FBXO32Q969P5 355 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 ELMO3Q96BJ8 720 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 ZNF396Q96N95 335 aaPredicted RBP12.95□□□□□ -0.34
TPT1-201ENST00000309246 PNKPQ96T60 521 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 XYLT2Q9H1B5 865 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 SMYD3Q9H7B4 428 aa12.95□□□□□ -0.34
TPT1-201ENST00000309246 ASCC3Q8N3C0 2202 aaKnown RBP12.94□□□□□ -0.34
TPT1-201ENST00000309246 SGK1O00141 431 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 GIPC1O14908 333 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 POLR2DO15514 142 aaKnown RBP12.94□□□□□ -0.34
TPT1-201ENST00000309246 COCHO43405 550 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 PHACTR2O75167 634 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 KAT7O95251 611 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 YEATS4O95619 227 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 STAU1O95793 577 aaKnown RBP12.94□□□□□ -0.34
TPT1-201ENST00000309246 ADH1CP00326 375 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 APODP05090 189 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 FAM163BP0C2L3 166 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 ADH5P11766 374 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 DHPSP49366 369 aaPredicted RBP12.94□□□□□ -0.34
TPT1-201ENST00000309246 NOVA1P51513 510 aaKnown RBP12.94□□□□□ -0.34
TPT1-201ENST00000309246 CDH8P55286 799 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 SCARA5Q6ZMJ2 495 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 FAM35AQ86V20 835 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 C11orf74Q86VG3 221 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
TPT1-201ENST00000309246 NUP93Q8N1F7 819 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 KIAA1958Q8N8K9 716 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
TPT1-201ENST00000309246 PLEKHO2Q8TD55 490 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 RLN3Q8WXF3 142 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
TPT1-201ENST00000309246 KCNK16Q96T55 309 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 SLC39A2Q9NP94 309 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 ARHGEF4Q9NR80 690 aa12.94□□□□□ -0.34
TPT1-201ENST00000309246 GON4LQ3T8J9 2241 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 ATP8B3O60423 1300 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 KHNYNO15037 678 aaKnown RBP12.93□□□□□ -0.34
TPT1-201ENST00000309246 EXOC3O60645 756 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
TPT1-201ENST00000309246 ATICP31939 592 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 EIF2DP41214 584 aaKnown RBP12.93□□□□□ -0.34
TPT1-201ENST00000309246 AFMP43652 599 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 SNRPFP62306 86 aaKnown RBP12.93□□□□□ -0.34
TPT1-201ENST00000309246 SHC2P98077 582 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 BIRC3Q13489 604 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 BMT2Q1RMZ1 405 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 ZNF699Q32M78 642 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 FOXD4L6Q3SYB3 417 aaPredicted RBP12.93□□□□□ -0.34
TPT1-201ENST00000309246 LY6G5CQ5SRR4 150 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 FOXD4L3Q6VB84 417 aaPredicted RBP12.93□□□□□ -0.34
TPT1-201ENST00000309246 ARMCX6Q7L4S7 300 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 C12orf56Q8IXR9 622 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 FRMD1Q8N878 549 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 PDZD8Q8NEN9 1154 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 SCAMP5Q8TAC9 235 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 OLIG1Q8TAK6 271 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 HMGB4Q8WW32 186 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 ZFRQ96KR1 1074 aaKnown RBP12.93□□□□□ -0.34
TPT1-201ENST00000309246 SDCBP2Q9H190 292 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 CCSER2Q9H7U1 834 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 MAGEF1Q9HAY2 307 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPT1-201ENST00000309246 TBC1D14Q9P2M4 693 aa12.93□□□□□ -0.34
TPT1-201ENST00000309246 CHORDC1Q9UHD1 332 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms