RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 SDC4P31431 198 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 LSP1P33241 339 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 MDH1P40925 334 aaKnown RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 DPYSL3Q14195 570 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 PTGISQ16647 500 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 XKR4Q5GH76 650 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 MDH1BQ5I0G3 518 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 HIBCHQ6NVY1 386 aaPredicted RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 B3GALNT2Q8NCR0 500 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 SPATA18Q8TC71 538 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 FAM149B1Q96BN6 582 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 PPP1R10Q96QC0 940 aaKnown RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 RBM15Q96T37 977 aaKnown RBP eCLIP11.91□□□□□ -0.5
SCG2-201ENST00000305409 RHOBTB2Q9BYZ6 727 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 SENP6Q9GZR1 1112 aaPredicted RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 SAYSD1Q9NPB0 183 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 F8W810 466 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 ADAMTS4O75173 837 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 EIF3BP55884 814 aaKnown RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 HDAC4P56524 1084 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 GSCP56915 257 aaPredicted RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 EIF3EP60228 445 aaKnown RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 PPP2R2AP63151 447 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 ADIGQ0VDE8 80 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 PCBP1Q15365 356 aaKnown RBP eCLIP11.91□□□□□ -0.5
SCG2-201ENST00000305409 SV2CQ496J9 727 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 AGMOQ6ZNB7 445 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 BBS12Q6ZW61 710 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 PIGZQ86VD9 579 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 UNC93AQ86WB7 457 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 ANKMY2Q8IV38 441 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 FUKQ8N0W3 1084 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 ANKRD52Q8NB46 1076 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 MED10Q9BTT4 135 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 SNRNP25Q9BV90 132 aaKnown RBP11.91□□□□□ -0.5
SCG2-201ENST00000305409 PADI3Q9ULW8 664 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 ZNF236Q9UL36 1845 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 TRPM7Q96QT4 1865 aa11.91□□□□□ -0.5
SCG2-201ENST00000305409 ARL5CA6NH57 179 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 DNALI1O14645 258 aaPredicted RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 TTC4O95801 387 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 RBP3P10745 1247 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 IL4RP24394 825 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 MAP3K7CLP57077 242 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 BST2Q10589 180 aaKnown RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 AUHQ13825 339 aaKnown RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 AGBL2Q5U5Z8 902 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 HOOK3Q86VS8 718 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 CRYBG2Q8N1P7 616 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 PYROXD2Q8N2H3 581 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 TTC39CQ8N584 583 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 RSAD2Q8WXG1 361 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 SENP8Q96LD8 212 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 MLXIPLQ9NP71 852 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 GDAP2Q9NXN4 497 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 XPOTO43592 962 aaKnown RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 MYCP01106 439 aaPredicted RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 BCAT1P54687 386 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 IRF5Q13568 498 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 STILQ15468 1287 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 ARHGAP17Q68EM7 881 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 PAQR9Q6ZVX9 377 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 SERINC5Q86VE9 423 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 FAM131BQ86XD5 332 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 CCDC13Q8IYE1 715 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 CYP4X1Q8N118 509 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 NKD2Q969F2 451 aaPredicted RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 TLCD1Q96CP7 247 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 KCNK16Q96T55 309 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 DDX43Q9NXZ2 648 aaKnown RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 SLC12A6Q9UHW9 1150 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 TPX2Q9ULW0 747 aaKnown RBP11.9□□□□□ -0.5
SCG2-201ENST00000305409 MFHAS1Q9Y4C4 1052 aa11.9□□□□□ -0.5
SCG2-201ENST00000305409 MYBPHLA2RUH7 354 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 E7EVH7 732 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 F5H423 210 aaPredicted RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 H7C0C1 242 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 ITGAVP06756 1048 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 THP07101 528 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 PTPN1P18031 435 aaKnown RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 PTPN7P35236 360 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 RPL22P35268 128 aaKnown RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 PCK1P35558 622 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 MAGEA4P43358 317 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 ATP5OP48047 213 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 CTCFP49711 727 aaPredicted RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 FAXCQ5TGI0 409 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 HFE2Q6ZVN8 426 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 TRMT10CQ7L0Y3 403 aaKnown RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 RSPH3Q86UC2 560 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 ADAM32Q8TC27 787 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 MGARPQ8TDB4 240 aa11.89□□□□□ -0.51
SCG2-201ENST00000305409 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.89□□□□□ -0.51
SCG2-201ENST00000305409 TBCBQ99426 244 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms