RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 XRCC4Q13426 336 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SLC29A2Q14542 456 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CNGA3Q16281 694 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 BBS9Q3SYG4 887 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SLC27A1Q6PCB7 646 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TMC3Q7Z5M5 1100 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TMEM139Q8IV31 216 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CXorf38Q8TB03 319 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TMEM175Q9BSA9 504 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 PORCNQ9H237 461 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CCDC134Q9H6E4 229 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SMYD3Q9H7B4 428 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 NPHS2Q9NP85 383 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CNOT8Q9UFF9 292 aaKnown RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SEPT3Q9UH03 358 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 STAP1Q9ULZ2 295 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 PCDHB5Q9Y5E4 795 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TTLL13PA6NNM8 815 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 GIPC1O14908 333 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 RTN3O95197 1032 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CKMP06732 381 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CALB2P22676 271 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 HARS2P49590 506 aaKnown RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 KLK7P49862 253 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 DUOXA2Q1HG44 320 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 DNAJC24Q6P3W2 148 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 FAM81AQ8TBF8 368 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TJP2Q9UDY2 1190 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 PHTF1Q9UMS5 762 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 MAD1L1Q9Y6D9 718 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 KPNA7A9QM74 516 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 FKBP6O75344 327 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 AP1G2O75843 785 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 B3GAT3O94766 335 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SLC2A3P11169 496 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 MX2P20592 715 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TBXAS1P24557 533 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TARSP26639 723 aaKnown RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 NAMPTP43490 491 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 COL13A1Q5TAT6 717 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 RGL4Q8IZJ4 473 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 DTX3LQ8TDB6 740 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 USP6NLQ92738 828 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 MTBPQ96DY7 904 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CFAP36Q96G28 342 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SCYL1Q96KG9 808 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 GORASP1Q9BQQ3 440 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 LACRTQ9GZZ8 138 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 PFDN4Q9NQP4 134 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 ZNF212Q9UDV6 495 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 ANAPC7Q9UJX3 599 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 GABRQQ9UN88 632 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 UBE4BO95155 1302 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 DOCK2Q92608 1830 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TTC36A6NLP5 189 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SKAP2O75563 359 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 FTLP02792 175 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 ATP5BP06576 529 aaKnown RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 FAM200BP0CF97 657 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SKIV2L2P42285 1042 aaKnown RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 GALCP54803 685 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 BASP1P80723 227 aaKnown RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 SLC34A1Q06495 639 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 GRSF1Q12849 480 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 CTTNQ14247 550 aaKnown RBP6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TTI2Q6NXR4 508 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 LLGL2Q6P1M3 1020 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 ACAD11Q709F0 780 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 RHOT1Q8IXI2 618 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 DAGLBQ8NCG7 672 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 FLCNQ8NFG4 579 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 POLD4Q9HCU8 107 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 ZDHHC4Q9NPG8 344 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TLR9Q9NR96 1032 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 INTS13Q9NVM9 706 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TMEM161AQ9NX61 479 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 PCDHB4Q9Y5E5 795 aa6.62□□□□□ -1.35
SCAPER-201ENST00000303521 TRAV19A0A0A6YYK7 116 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 OR6C75A6NL08 312 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 GPC4O75487 556 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 UCHL3P15374 230 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 RPL9P32969 192 aaKnown RBP6.61□□□□□ -1.35
SCAPER-201ENST00000303521 COILP38432 576 aaPredicted RBP6.61□□□□□ -1.35
SCAPER-201ENST00000303521 TMED10P49755 219 aaKnown RBP6.61□□□□□ -1.35
SCAPER-201ENST00000303521 CACNB1Q02641 598 aaPredicted RBP6.61□□□□□ -1.35
SCAPER-201ENST00000303521 TMEM62Q0P6H9 643 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 RPS6KA2Q15349 733 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 KLHDC7AQ5VTJ3 777 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 CWF19L1Q69YN2 538 aaKnown RBP6.61□□□□□ -1.35
SCAPER-201ENST00000303521 C16orf89Q6UX73 402 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 ENOSF1Q7L5Y1 443 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 RAB42Q8N4Z0 105 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 SCG3Q8WXD2 468 aaKnown RBP6.61□□□□□ -1.35
SCAPER-201ENST00000303521 DDX1Q92499 740 aaKnown RBP6.61□□□□□ -1.35
SCAPER-201ENST00000303521 FAM149B1Q96BN6 582 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 CYP26B1Q9NR63 512 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 ZNF510Q9Y2H8 683 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 NRAPQ86VF7 1730 aa6.61□□□□□ -1.35
SCAPER-201ENST00000303521 ABCA3Q99758 1704 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms