RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 BAG6P46379 1132 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 NDST1P52848 882 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 GDF10P55107 478 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 DEUP1Q05D60 604 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 FSTL1Q12841 308 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 TAF12Q16514 161 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 ZNF317Q96PQ6 595 aaPredicted RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 YY1AP1Q9H869 796 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 SLC26A4O43511 780 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 DCXO43602 365 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 BNIP3LO60238 219 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 STAG3L1P0CL83 205 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 UBAP2LQ14157 1087 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 TTC39BQ5VTQ0 682 aaPredicted RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 PPP1R2P3Q6NXS1 205 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 TMEM130Q8N3G9 435 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 RIBC1Q8N443 379 aaPredicted RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 HERPUD2Q9BSE4 406 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 TIPINQ9BVW5 301 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 C20orf96Q9NUD7 363 aaPredicted RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 TSPAN16Q9UKR8 245 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 SSX2IPQ9Y2D8 614 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 YDJCA8MPS7 323 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 MAPTP10636 758 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 CACNA2D1P54289 1103 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 BST1Q10588 318 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 USP10Q14694 798 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 SLC26A11Q86WA9 606 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 PDCD6IPQ8WUM4 868 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 ALKBH8Q96BT7 664 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 B3GNT5Q9BYG0 378 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 DMAC2Q9NW81 257 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 PEX1O43933 1283 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 NOL3O60936 208 aaKnown RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 PROCP04070 461 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 NAMPTP43490 491 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 DPYSL3Q14195 570 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 SH3PXD2AQ5TCZ1 1133 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 VSIG10LQ86VR7 867 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 SLC9A9Q8IVB4 645 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 DEFB107AQ8IZN7 70 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 GPRASP2Q96D09 838 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 MARK4Q96L34 752 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 MCM8Q9UJA3 840 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 ZMYM2Q9UBW7 1377 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 A0A0B4J269 797 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 KIF3CO14782 793 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 FNBP1LQ5T0N5 605 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 PTAR1Q7Z6K3 402 aaPredicted RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 ZBTB46Q86UZ6 589 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 CERKQ8TCT0 537 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 CNBD2Q96M20 576 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 CENPKQ9BS16 269 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 Q9H521 79 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 VCX3AQ9NNX9 186 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 SARS2Q9NP81 518 aaKnown RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 IRAK4Q9NWZ3 460 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 CHKBQ9Y259 395 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 PMPCBO75439 489 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 AP1G2O75843 785 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 ZNF286BP0CG31 522 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 AKAP5P24588 427 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 LRRC23Q53EV4 343 aaPredicted RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 KATNAL2Q8IYT4 538 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 IPMKQ8NFU5 416 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 SNRNP27Q8WVK2 155 aaKnown RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 OXNAD1Q96HP4 312 aaPredicted RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 NMUR2Q9GZQ4 415 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 DENND2DQ9H6A0 471 aaPredicted RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 PAPOLBQ9NRJ5 636 aaKnown RBP13.8□□□□□ -0.2
CASC4-201ENST00000299957 SHOC2Q9UQ13 582 aa13.8□□□□□ -0.2
CASC4-201ENST00000299957 RNF103-CHMP3A0A140T963 221 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 TSPAN3O60637 253 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 GMNNO75496 209 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 NFICP08651 508 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 KDELR1P24390 212 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 TAP1Q03518 808 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 MYBPC2Q14324 1141 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 CELF6Q96J87 481 aaKnown RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 FAM167AQ96KS9 214 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 BTBD10Q9BSF8 475 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 MRPL46Q9H2W6 279 aaKnown RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 ZMYND8Q9ULU4 1186 aaPredicted RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 PLA2G4CQ9UP65 541 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 DYNC1LI2O43237 492 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms