RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TNFSF9P41273 254 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 CCINQ13939 588 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 ENOX2Q16206 610 aaKnown RBP22.34■■□□□ 1.17
SMCO4-201ENST00000298966 TMC8Q8IU68 726 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 GPIHBP1Q8IV16 184 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 FAXDC2Q96IV6 333 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 ANKRD36BP1Q96IX9 119 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 NT5C1BQ96P26 610 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 SPAG5Q96R06 1193 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 LRRC3Q9BY71 257 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 SIX2Q9NPC8 291 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 RXFP3Q9NSD7 469 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 GTSE1Q9NYZ3 720 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 C2CD2Q9Y426 696 aa22.34■■□□□ 1.17
SMCO4-201ENST00000298966 BZW2Q9Y6E2 419 aaKnown RBP22.34■■□□□ 1.17
SMCO4-201ENST00000298966 KIF26AQ9ULI4 1882 aaPredicted RBP22.33■■□□□ 1.17
SMCO4-201ENST00000298966 TNNC2P02585 160 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 YWHAHQ04917 246 aaPredicted RBP22.33■■□□□ 1.17
SMCO4-201ENST00000298966 SFMBT2Q5VUG0 894 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 RRAGAQ7L523 313 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 BEST2Q8NFU1 509 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 JAKMIP2Q96AA8 810 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 ZFYVE19Q96K21 471 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 OXCT2Q9BYC2 517 aaPredicted RBP22.33■■□□□ 1.17
SMCO4-201ENST00000298966 STK33Q9BYT3 514 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 IMPG2Q9BZV3 1241 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 AIPL1Q9NZN9 384 aa22.33■■□□□ 1.17
SMCO4-201ENST00000298966 CCDC163A0A0D9SF12 145 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 EPHB6O15197 1021 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 KCNK5O95279 499 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 TMEM191BP0C7N4 346 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 ANXA13P27216 316 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 HOXC13P31276 330 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 RAP1GAPP47736 663 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 ALDH1A3P47895 512 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 BIRC3Q13489 604 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 STXBP5Q5T5C0 1151 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 KBTBD6Q86V97 674 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 CCDC170Q8IYT3 715 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 TAF4BQ92750 862 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 PGLYRP2Q96PD5 576 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 OBP2AQ9NY56 170 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 PCDHGA5Q9Y5G8 931 aa22.32■■□□□ 1.16
SMCO4-201ENST00000298966 LRRC53A6NM62 1247 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 XPOTO43592 962 aaKnown RBP22.31■■□□□ 1.16
SMCO4-201ENST00000298966 PHACTR2O75167 634 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 CXCL8P10145 99 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 STAT1P42224 750 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 PIK3CAP42336 1068 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 GCNT1Q02742 428 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 DUSP4Q13115 394 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 ARHGAP15Q53QZ3 475 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 TAS1R2Q8TE23 839 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 ZNF516Q92618 1163 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 ATXN3LQ9H3M9 355 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 NLRC4Q9NPP4 1024 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 DNAJC12Q9UKB3 198 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 ASB3Q9Y575 518 aa22.31■■□□□ 1.16
SMCO4-201ENST00000298966 ATG2BQ96BY7 2078 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 FRYQ5TBA9 3013 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 SSU72P8A0A1W2PR75 194 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 FGF19O95750 216 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 FERP16591 822 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 CYLC1P35663 651 aaPredicted RBP22.3■■□□□ 1.16
SMCO4-201ENST00000298966 PXNP49023 591 aaPredicted RBP22.3■■□□□ 1.16
SMCO4-201ENST00000298966 MFAP3P55082 362 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 JAM2P57087 298 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 SEZ6Q53EL9 994 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 PLA2G2CQ5R387 149 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 GPR158Q5T848 1215 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 TDRD10Q5VZ19 366 aaKnown RBP22.3■■□□□ 1.16
SMCO4-201ENST00000298966 E4F1Q66K89 784 aaPredicted RBP22.3■■□□□ 1.16
SMCO4-201ENST00000298966 CCAR2Q8N163 923 aaKnown RBP22.3■■□□□ 1.16
SMCO4-201ENST00000298966 BPIFB1Q8TDL5 484 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 LRRC3BQ96PB8 259 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 VPS45Q9NRW7 570 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 SLC8A2Q9UPR5 921 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 FHOD1Q9Y613 1164 aa22.3■■□□□ 1.16
SMCO4-201ENST00000298966 OR6C75A6NL08 312 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 M0QZQ0 153 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 ATG13O75143 517 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 OAZ2O95190 189 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 VNN2O95498 520 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 HLA-DRAP01903 254 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 SERPING1P05155 500 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 OR4Q2P0C623 313 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 TBXAS1P24557 533 aaPredicted RBP22.29■■□□□ 1.16
SMCO4-201ENST00000298966 MPLP40238 635 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 GPR17Q13304 367 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 ASIC2Q16515 512 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 SLC10A6Q3KNW5 377 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 ITPRIPL2Q3MIP1 535 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 RNF43Q68DV7 783 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 TRAPPC11Q7Z392 1133 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 FAM212AQ96EL1 285 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 TMEM209Q96SK2 561 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 CRISPLD1Q9H336 500 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 THG1LQ9NWX6 298 aaKnown RBP22.29■■□□□ 1.16
SMCO4-201ENST00000298966 TUBGCP4Q9UGJ1 667 aa22.29■■□□□ 1.16
SMCO4-201ENST00000298966 TIMM13Q9Y5L4 95 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms