RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CATSPER2Q96P56 530 aa15.46■□□□□ 0.06
SPIDR-201ENST00000297423 MAN1C1Q9NR34 630 aa15.46■□□□□ 0.06
SPIDR-201ENST00000297423 PIH1D1Q9NWS0 290 aaKnown RBP15.46■□□□□ 0.06
SPIDR-201ENST00000297423 TMCO1Q9UM00 188 aa15.46■□□□□ 0.06
SPIDR-201ENST00000297423 E5RJQ4 531 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 PRPF4O43172 522 aaKnown RBP eCLIP15.45■□□□□ 0.061e-8■■■■■ 32.2
SPIDR-201ENST00000297423 FOXD2O60548 495 aaPredicted RBP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 KRT37O76014 449 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 GNA15P30679 374 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 CHN2P52757 468 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 NCKAP1LP55160 1127 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 SH3BGRP55822 239 aaPredicted RBP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 CBX3Q13185 183 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 KRT81Q14533 505 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 SEZ6Q53EL9 994 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 B3GNT6Q6ZMB0 384 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 USP37Q86T82 979 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 ACTL9Q8TC94 416 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 PSPC1Q8WXF1 523 aaKnown RBP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 BORCS6Q96GS4 357 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 CCT7Q99832 543 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 TEKT3Q9BXF9 490 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 TMEM206Q9H813 350 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 TXNDC16Q9P2K2 825 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 DNAJC16Q9Y2G8 782 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 ZNF862O60290 1169 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 TOP3BO95985 862 aaKnown RBP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 SRGAP2CP0DJJ0 459 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 SRGAP2BP0DMP2 458 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 ENO3P13929 434 aaPredicted RBP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 KCNA4P22459 653 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 PRELPP51888 382 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 MRPS22P82650 360 aaKnown RBP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 OTUD4Q01804 1114 aaKnown RBP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 NRF1Q16656 503 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 FNBP1LQ5T0N5 605 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 OLFML3Q9NRN5 406 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 GOLGA8QA0A0J9YX86 632 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 GOLGA8OA6NCC3 632 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 E9PBE3 544 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 GOLGA8NF8WBI6 632 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
SPIDR-201ENST00000297423 KLHL41O60662 606 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 CYP1A2P05177 515 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 ADRB2P07550 413 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 ACOT2P49753 483 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 PDK1Q15118 436 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 GPR162Q16538 588 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 KLC3Q6P597 504 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 KCTD6Q8NC69 237 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 DENND1AQ8TEH3 1009 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 PLEKHG4BQ96PX9 1271 aa15.45■□□□□ 0.06
SPIDR-201ENST00000297423 DENND3A2RUS2 1198 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 KBTBD13C9JR72 458 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 PROSCO94903 275 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 ASLP04424 464 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 FDX1P10109 184 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 ARP10275 920 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 SOX11P35716 441 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 C1orf186Q6ZWK4 172 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 SERAC1Q96JX3 654 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 COPS7BQ9H9Q2 264 aaPredicted RBP15.44■□□□□ 0.06
SPIDR-201ENST00000297423 SOX13Q9UN79 622 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 NDC80O14777 642 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 XPOTO43592 962 aaKnown RBP15.44■□□□□ 0.06
SPIDR-201ENST00000297423 CFHP08603 1231 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 UQCRBP14927 111 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 ABCD1P33897 745 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 COPAP53621 1224 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 CLEC16AQ2KHT3 1053 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 MAP7D1Q3KQU3 841 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 UTS2BQ765I0 119 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 MCF2L2Q86YR7 1114 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 ZNF180Q9UJW8 692 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 ARHGAP10A1A4S6 786 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 TTC36A6NLP5 189 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 MEIS2O14770 477 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 APRTP07741 180 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 PSMA2P25787 234 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 IMPG2Q9BZV3 1241 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 RPAP3Q9H6T3 665 aaPredicted RBP15.44■□□□□ 0.06
SPIDR-201ENST00000297423 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
SPIDR-201ENST00000297423 RAB6BQ9NRW1 208 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 SLC24A2Q9UI40 661 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 FOCADQ5VW36 1801 aa15.44■□□□□ 0.06
SPIDR-201ENST00000297423 TFPTP0C1Z6 253 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 FGFR3P22607 806 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 SERPINB5P36952 375 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 PKNOX1P55347 436 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 PSMC5P62195 406 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 LSAMPQ13449 338 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 SEPT6Q14141 434 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 MSS51Q4VC12 460 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 VWA5B1Q5TIE3 1220 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 FAM71AQ8IYT1 594 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 CSADQ9Y600 493 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 TM7SF2O76062 418 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 RGS2P41220 211 aa15.43■□□□□ 0.06
SPIDR-201ENST00000297423 CLK2P49760 499 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms