RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TMEM63BQ5T3F8 832 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 TTC39BQ5VTQ0 682 aaPredicted RBP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 POLNQ7Z5Q5 900 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 C12orf56Q8IXR9 622 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ACSS3Q9H6R3 686 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 TCRBV9S1A1TA0A576 114 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 CCDC78A2IDD5 438 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 TCEA3O75764 348 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 GPX6P59796 221 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 TMPRSS6Q8IU80 811 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 LRRC71Q8N4P6 559 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 RBM15BQ8NDT2 890 aaKnown RBP13.93□□□□□ -0.18
SCAF4-201ENST00000286835 TTC16Q8NEE8 873 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 JOSD2Q8TAC2 188 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 MFSD14AQ96MC6 490 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 DGKIO75912 1065 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 KCNA4P22459 653 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 GRIK3Q13003 919 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCAF4-201ENST00000286835 GSTCDQ8NEC7 633 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 CEP70Q8NHQ1 597 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 SREK1Q8WXA9 508 aaKnown RBP13.93□□□□□ -0.18
SCAF4-201ENST00000286835 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 SERAC1Q96JX3 654 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 LRRC42Q9Y546 428 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 GOLGB1Q14789 3259 aaKnown RBP13.93□□□□□ -0.18
SCAF4-201ENST00000286835 MED7O43513 233 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 CST3P01034 146 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-201ENST00000286835 GSTT1P30711 240 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 NEK3P51956 506 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 YWHAEP62258 255 aaKnown RBP13.93□□□□□ -0.18
SCAF4-201ENST00000286835 TFDP2Q14188 446 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 TAF5Q15542 800 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 ZNF568Q3ZCX4 644 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 CCDC60Q8IWA6 550 aaPredicted RBP13.93□□□□□ -0.18
SCAF4-201ENST00000286835 SH3TC2Q8TF17 1288 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 ASNSD1Q9NWL6 643 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 DNAJC16Q9Y2G8 782 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 PRR5-ARHGAP8B1AHC4 643 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 TNFSF9P41273 254 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 ARHGAP8P85298 464 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 DEUP1Q05D60 604 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 DPYSL3Q14195 570 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 FAM160B1Q5W0V3 765 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 PPP1R2P3Q6NXS1 205 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 SLC39A4Q6P5W5 647 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 SLC26A11Q86WA9 606 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 CDKL2Q92772 493 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 NIF3L1Q9GZT8 377 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 PPCSQ9HAB8 311 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 ETAA1Q9NY74 926 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 AKT3Q9Y243 479 aa13.93□□□□□ -0.18
SCAF4-201ENST00000286835 TMEM191CA6NGB0 347 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 A6NJR5 290 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 ROR2Q01974 943 aaKnown RBP13.92□□□□□ -0.18
SCAF4-201ENST00000286835 KLF1Q13351 362 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-201ENST00000286835 DNAL1Q4LDG9 190 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 TNFAIP8L3Q5GJ75 292 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 ANKLE1Q8NAG6 615 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 TJP2Q9UDY2 1190 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 LAMB1P07942 1786 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 AIM2O14862 343 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 LIN7AO14910 233 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-201ENST00000286835 TMEM63AO94886 807 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 TCN1P20061 433 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-201ENST00000286835 XKR3Q5GH77 459 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 PLEKHA7Q6IQ23 1121 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 DENND1BQ6P3S1 775 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 GSDMBQ8TAX9 411 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 FAM149B1Q96BN6 582 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 DHX35Q9H5Z1 703 aaKnown RBP13.92□□□□□ -0.18
SCAF4-201ENST00000286835 PDP2Q9P2J9 529 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 TAGLN3Q9UI15 199 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 POLIQ9UNA4 740 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 ADCY3O60266 1144 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 HSPA4LO95757 839 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 ANPEPP15144 967 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 MAP1SQ66K74 1059 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-201ENST00000286835 FAM83AQ86UY5 434 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 GALNT4Q8N4A0 578 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 ICA1LQ8NDH6 482 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 NLGN2Q8NFZ4 835 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 SCYL1Q96KG9 808 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 FERMT1Q9BQL6 677 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 PXMP2Q9NR77 195 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 KCNG1Q9UIX4 513 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 COQ4Q9Y3A0 265 aa13.92□□□□□ -0.18
SCAF4-201ENST00000286835 ZNF862O60290 1169 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 GNAZP19086 355 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 TYK2P29597 1187 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 TMED1Q13445 227 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 EFHC2Q5JST6 749 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 OLFML2BQ68BL8 750 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 DENND5BQ6ZUT9 1274 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 RNF148Q8N7C7 305 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 NETO2Q8NC67 525 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 CLMNQ96JQ2 1002 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms