RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 NCANO14594 1321 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 XIRP2A4UGR9 3374 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 FAM92AA1XBS5 289 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 SLC38A8A6NNN8 435 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 PJA2O43164 708 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 CYP1A2P05177 515 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 ARHGAP25P42331 645 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 GSCP56915 257 aaPredicted RBP22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 MRPS5P82675 430 aaKnown RBP22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 MAMLD1Q13495 774 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 OR6B2Q6IFH4 312 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 PLEKHA7Q6IQ23 1121 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 CCDC149Q6ZUS6 474 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 REXO1L1PQ8IX06 675 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 KIAA1524Q8TCG1 905 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 IGFLR1Q9H665 355 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 CNGB3Q9NQW8 809 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 STRIP2Q9ULQ0 834 aa22.93■■□□□ 1.26
PDLIM3-203ENST00000284771 ZBED1O96006 694 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 POU3F3P20264 500 aaPredicted RBP22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 DAOAP59103 153 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 SLC6A3Q01959 620 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 PPP1R15BQ5SWA1 713 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 KIAA1328Q86T90 577 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 SIX6OS1Q8N1H7 587 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 C17orf53Q8N3J3 647 aaPredicted RBP22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 C3orf20Q8ND61 904 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 CTNNBL1Q8WYA6 563 aaPredicted RBP22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 CEP295NLQ96MC4 621 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 TRMT1Q9NXH9 659 aaKnown RBP22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 COG5Q9UP83 839 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 ZKSCAN5Q9Y2L8 839 aa22.92■■□□□ 1.26
PDLIM3-203ENST00000284771 YJEFN3A6XGL0 299 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 E7ENQ6 273 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 GOLGA8SH3BPF8 625 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 ZMYND10O75800 440 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 GLP2RO95838 553 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 MYBL1P10243 752 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 LIN9Q5TKA1 542 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 HFE2Q6ZVN8 426 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 DNAJB7Q7Z6W7 309 aaPredicted RBP22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 MSANTD4Q8NCY6 345 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 OSGEPQ9NPF4 335 aa22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 AVENQ9NQS1 362 aaPredicted RBP22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 SPTBN5Q9NRC6 3674 aaKnown RBP22.91■■□□□ 1.26
PDLIM3-203ENST00000284771 LINC01565O15544 149 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 GRAP2O75791 330 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 RPL7AP62424 266 aaKnown RBP22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 Q7L0L9 218 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 SCML4Q8N228 414 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 SLC35G2Q8TBE7 412 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 HDAC7Q8WUI4 952 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 PSMG2Q969U7 264 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 TRIM11Q96F44 468 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 CDCA3Q99618 268 aaPredicted RBP22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 TTLL2Q9BWV7 592 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 TRIM7Q9C029 511 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 LUC7LQ9NQ29 371 aaKnown RBP22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 WDR35Q9P2L0 1181 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 TMEM59LQ9UK28 342 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 MAGED2Q9UNF1 606 aaPredicted RBP22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 YWHAQP27348 245 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 EPHB3P54753 998 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 SNX16P57768 344 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 HABP4Q5JVS0 413 aaKnown RBP22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 PPM1LQ5SGD2 360 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 FAM102AQ5T9C2 384 aaPredicted RBP22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 TRNP1Q6NT89 227 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 ZDHHC17Q8IUH5 632 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 CCAR2Q8N163 923 aaKnown RBP22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 JOSD2Q8TAC2 188 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 MYRFLQ96LU7 910 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 SCML2Q9UQR0 700 aa22.9■■□□□ 1.26
PDLIM3-203ENST00000284771 SIGLEC16A6NMB1 481 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 CCL16O15467 120 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 FBXO21O94952 628 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 RTN3O95197 1032 aaPredicted RBP22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 LRG1P02750 347 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 FYNP06241 537 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 CSH1P0DML2 217 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 CSH2P0DML3 217 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 RFC1P35251 1148 aaPredicted RBP22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 TAF10Q12962 218 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 ZNF662Q6ZS27 426 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 RTL10Q7L3V2 364 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 SLC26A9Q7LBE3 791 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 SCD5Q86SK9 330 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 NUP85Q9BW27 656 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 LRRC3Q9BY71 257 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 FBXO44Q9H4M3 255 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 NMUR1Q9HB89 426 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 ZNF334Q9HCZ1 680 aaPredicted RBP22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 LZTFL1Q9NQ48 299 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 METTL5Q9NRN9 209 aaKnown RBP22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 PARVAQ9NVD7 372 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 OSER1Q9NX31 292 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 MYO16Q9Y6X6 1858 aa22.89■■□□□ 1.25
PDLIM3-203ENST00000284771 KRT3P12035 628 aa22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 IGFBP4P22692 258 aa22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 KIF5AQ12840 1032 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms