RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 OLFML1Q6UWY5 402 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 SYDE1Q6ZW31 735 aaPredicted RBP21.97■■□□□ 1.11
YBX3-202ENST00000279550 NPAS4Q8IUM7 802 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 GOLGA6L1Q8N7Z2 621 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 APPL2Q8NEU8 664 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 KHSRPQ92945 711 aaKnown RBP eCLIP21.97■■□□□ 1.112e-7■■□□□ 13.3
YBX3-202ENST00000279550 UROC1Q96N76 676 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 PEBP4Q96S96 227 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 LRRC4CQ9HCJ2 640 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 HOMER3Q9NSC5 361 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 HESX1Q9UBX0 185 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 ASIC3Q9UHC3 531 aa21.97■■□□□ 1.11
YBX3-202ENST00000279550 GOLGA6CA6NDK9 693 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 HOXA2O43364 376 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 TRUB2O95900 331 aaKnown RBP21.96■■□□□ 1.11
YBX3-202ENST00000279550 GOLGA6DP0CG33 693 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 ZNF143P52747 638 aaPredicted RBP21.96■■□□□ 1.11
YBX3-202ENST00000279550 CEP85LQ5SZL2 805 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.96■■□□□ 1.112e-7■■■■□ 25
YBX3-202ENST00000279550 TMEM110Q86TL2 294 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 PRUNE1Q86TP1 453 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 ZNF280BQ86YH2 543 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 ADGRF2Q8IZF7 708 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 SH2D3CQ8N5H7 860 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 GRK7Q8WTQ7 553 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 CASD1Q96PB1 797 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 GOLGA6AQ9NYA3 693 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 MICAL3Q7RTP6 2002 aa21.96■■□□□ 1.11
YBX3-202ENST00000279550 ABHD14A-ACY1A0A1B0GW23 586 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 PAPSS1O43252 624 aaPredicted RBP21.95■■□□□ 1.1
YBX3-202ENST00000279550 B3GAT3O94766 335 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 DDHD2O94830 711 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 TJP3O95049 919 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 CD48P09326 243 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 WARSP23381 471 aaKnown RBP21.95■■□□□ 1.1
YBX3-202ENST00000279550 RNASELQ05823 741 aaKnown RBP21.95■■□□□ 1.1
YBX3-202ENST00000279550 ZNF844Q08AG5 666 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 TAZQ16635 292 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 HADHQ16836 314 aaKnown RBP21.95■■□□□ 1.1
YBX3-202ENST00000279550 C15orf59Q2T9L4 293 aaPredicted RBP21.95■■□□□ 1.1
YBX3-202ENST00000279550 TFDP3Q5H9I0 405 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 CYP4V2Q6ZWL3 525 aaPredicted RBP21.95■■□□□ 1.1
YBX3-202ENST00000279550 HAUS1Q96CS2 278 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 CNPY3Q9BT09 278 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 B3GNT5Q9BYG0 378 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 WHRNQ9P202 907 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 PCDH10Q9P2E7 1040 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 DNPEPQ9ULA0 475 aa21.95■■□□□ 1.1
YBX3-202ENST00000279550 B4GALT3O60512 393 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 HUS1O60921 280 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 GAS8O95995 478 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 KRT7P08729 469 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 PDGFRAP16234 1089 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 KDELR1P24390 212 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 TKTP29401 623 aaKnown RBP21.94■■□□□ 1.1
YBX3-202ENST00000279550 GATMP50440 423 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 PMS2P54278 862 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 ODF2Q5BJF6 829 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 RHBDF2Q6PJF5 856 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 TOP6BLQ8N6T0 577 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 MIS12Q9H081 205 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 ASNSD1Q9NWL6 643 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 PRKAG2Q9UGJ0 569 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 CYB561D2O14569 222 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 ATP2C2O75185 946 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 VPS41P49754 854 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 SLC6A3Q01959 620 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 CCDC14Q49A88 953 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 GLIPR1L2Q4G1C9 344 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 KCTD16Q68DU8 428 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 SCUBE3Q8IX30 993 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 COLGALT2Q8IYK4 626 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 ANKRD52Q8NB46 1076 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 FAM76AQ8TAV0 307 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 STK32AQ8WU08 396 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 SNF8Q96H20 258 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 TMBIM4Q9HC24 238 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 PSD3Q9NYI0 1048 aa21.94■■□□□ 1.1
YBX3-202ENST00000279550 MTRF1LQ9UGC7 380 aaKnown RBP21.94■■□□□ 1.1
YBX3-202ENST00000279550 DPYSL4O14531 572 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 RNF8O76064 485 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 LMAN1P49257 510 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 BST2Q10589 180 aaKnown RBP21.93■■□□□ 1.1
YBX3-202ENST00000279550 ACAP1Q15027 740 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 WSCD1Q658N2 575 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 ZNF771Q7L3S4 317 aaPredicted RBP21.93■■□□□ 1.1
YBX3-202ENST00000279550 GLIS1Q8NBF1 620 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 SLC2A14Q8TDB8 520 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 CLEC4CQ8WTT0 213 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 RSPH1Q8WYR4 309 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 HSPH1Q92598 858 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 SENP8Q96LD8 212 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 CFAP57Q96MR6 1250 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 FAM193BQ96PV7 902 aaPredicted RBP21.93■■□□□ 1.1
YBX3-202ENST00000279550 AAASQ9NRG9 546 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 USP18Q9UMW8 372 aa21.93■■□□□ 1.1
YBX3-202ENST00000279550 ACRP10323 421 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 ATF2P15336 505 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 ACAT1P24752 427 aaKnown RBP21.92■■□□□ 1.1
YBX3-202ENST00000279550 KLRC2P26717 231 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms