RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FAXDC2Q96IV6 333 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 TRPV2Q9Y5S1 764 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 NUDT17P0C025 328 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 RBP3P10745 1247 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 COPS2P61201 443 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 SV2CQ496J9 727 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 RSPH3Q86UC2 560 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 ANKMY2Q8IV38 441 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 TTC39CQ8N584 583 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 MGARPQ8TDB4 240 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 TSPYL2Q9H2G4 693 aaPredicted RBP18.77■□□□□ 0.6
CAPN1-201ENST00000279247 MLXIPLQ9NP71 852 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 CREBZFQ9NS37 354 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 TRMT13Q9NUP7 481 aaKnown RBP18.77■□□□□ 0.6
CAPN1-201ENST00000279247 Q9Y3F1 56 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 SHOX2O60902 331 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-201ENST00000279247 BASP1P80723 227 aaKnown RBP18.76■□□□□ 0.59
CAPN1-201ENST00000279247 SKOR1P84550 965 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 OASLQ15646 514 aaKnown RBP18.76■□□□□ 0.59
CAPN1-201ENST00000279247 ADAM7Q9H2U9 754 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 NINJ2Q9NZG7 142 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 H7C0C1 242 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 ATP5OP48047 213 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 NDUFV1P49821 464 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 LMNB2Q03252 620 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 ADIGQ0VDE8 80 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 PTGISQ16647 500 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 MDH1BQ5I0G3 518 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 NME8Q8N427 588 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 B3GALNT2Q8NCR0 500 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 GJA9P57773 515 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 BST2Q10589 180 aaKnown RBP18.76■□□□□ 0.59
CAPN1-201ENST00000279247 STILQ15468 1287 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 PKDCCQ504Y2 493 aa18.76■□□□□ 0.59
CAPN1-201ENST00000279247 DARS2Q6PI48 645 aaKnown RBP18.76■□□□□ 0.59
CAPN1-201ENST00000279247 KHSRPQ92945 711 aaKnown RBP eCLIP18.76■□□□□ 0.59
CAPN1-201ENST00000279247 DHX35Q9H5Z1 703 aaKnown RBP18.76■□□□□ 0.59
CAPN1-201ENST00000279247 F5H423 210 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-201ENST00000279247 TTC4O95801 387 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 KCNE1P15382 129 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 CREB1P16220 341 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 BBS12Q6ZW61 710 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 PIGZQ86VD9 579 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 UNC93AQ86WB7 457 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 ZBED8Q8IZ13 594 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 ANKRD52Q8NB46 1076 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 C3orf58Q8NDZ4 430 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 SNRNP25Q9BV90 132 aaKnown RBP18.75■□□□□ 0.59
CAPN1-201ENST00000279247 SLC4A5Q9BY07 1137 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 TMPRSS4Q9NRS4 437 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 ZNF236Q9UL36 1845 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 DNALI1O14645 258 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-201ENST00000279247 SEPT4O43236 478 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 IFNAR2P48551 515 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 CTCFP49711 727 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-201ENST00000279247 BCAT1P54687 386 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 MAP3K7CLP57077 242 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 PCBP1Q15365 356 aaKnown RBP eCLIP18.75■□□□□ 0.591e-8■■■■■ 32.7
CAPN1-201ENST00000279247 AGBL2Q5U5Z8 902 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 ANKRD22Q5VYY1 191 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 DSTYKQ6XUX3 929 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 FAM131BQ86XD5 332 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 ARFGAP2Q8N6H7 521 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 CMASQ8NFW8 434 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-201ENST00000279247 P3H4Q92791 437 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 HHIPL1Q96JK4 782 aa18.75■□□□□ 0.59
CAPN1-201ENST00000279247 DDX43Q9NXZ2 648 aaKnown RBP18.75■□□□□ 0.59
CAPN1-201ENST00000279247 MCF2LO15068 1137 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 THP07101 528 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 PITX1P78337 314 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-201ENST00000279247 DPYSL3Q14195 570 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 FAXCQ5TGI0 409 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 CYP4V2Q6ZWL3 525 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-201ENST00000279247 TMEM110Q86TL2 294 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 TAX1BP1Q86VP1 789 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 CCDC13Q8IYE1 715 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 GSTCDQ8NEC7 633 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 SLC35B2Q8TB61 432 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 RHOBTB2Q9BYZ6 727 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 VPS37BQ9H9H4 285 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 TPX2Q9ULW0 747 aaKnown RBP18.74■□□□□ 0.59
CAPN1-201ENST00000279247 PADI3Q9ULW8 664 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 NR2E3Q9Y5X4 410 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 HDAC4P56524 1084 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 AUHQ13825 339 aaKnown RBP18.74■□□□□ 0.59
CAPN1-201ENST00000279247 HIBCHQ6NVY1 386 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-201ENST00000279247 TRMT10CQ7L0Y3 403 aaKnown RBP18.74■□□□□ 0.59
CAPN1-201ENST00000279247 ADAM32Q8TC27 787 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 SENP8Q96LD8 212 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 LCMT1Q9UIC8 334 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 ARL5CA6NH57 179 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 POC1B-GALNT4F8VUJ3 575 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 MGEA5O60502 916 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 ALDH1A1P00352 501 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 PNPLA4P41247 253 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 MAGEA4P43358 317 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 LRRC14Q15048 493 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 DCAF6Q58WW2 860 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 FUKQ8N0W3 1084 aa18.74■□□□□ 0.59
CAPN1-201ENST00000279247 TCRBV7S3A2A0A539 114 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms