RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ABHD8Q96I13 439 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 BRD8Q9H0E9 1235 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 WWP1Q9H0M0 922 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 KBTBD13C9JR72 458 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 F8W8V4 182 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 ALOX15BO15296 676 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 WEE2P0C1S8 567 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 GAP43P17677 238 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
HERC6-202ENST00000273960 PEX3P56589 373 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 RPL10AP62906 217 aaKnown RBP13.34□□□□□ -0.27
HERC6-202ENST00000273960 KRT72Q14CN4 511 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 DCUN1D2Q6PH85 259 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
HERC6-202ENST00000273960 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 LRGUKQ96M69 825 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 CCT7Q99832 543 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 TUBGCP4Q9UGJ1 667 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 BARX2Q9UMQ3 279 aaPredicted RBP13.34□□□□□ -0.27
HERC6-202ENST00000273960 GAKO14976 1311 aa13.34□□□□□ -0.27
HERC6-202ENST00000273960 MEIS2O14770 477 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 SEC24DO94855 1032 aaPredicted RBP13.33□□□□□ -0.27
HERC6-202ENST00000273960 ABHD2P08910 425 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.27
HERC6-202ENST00000273960 PSMC5P62195 406 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 ANO5Q75V66 913 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 MOCOSQ96EN8 888 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.27
HERC6-202ENST00000273960 PCSK1NQ9UHG2 260 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 DNAJC16Q9Y2G8 782 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 AFG3L2Q9Y4W6 797 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 MAD1L1Q9Y6D9 718 aa13.33□□□□□ -0.27
HERC6-202ENST00000273960 E9PBE3 544 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 NDC80O14777 642 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 KLHL41O60662 606 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 ADSSP30520 456 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 VCPP55072 806 aaKnown RBP13.33□□□□□ -0.28
HERC6-202ENST00000273960 CENPCQ03188 943 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 TBL3Q12788 808 aaKnown RBP13.33□□□□□ -0.28
HERC6-202ENST00000273960 C6orf183Q5T699 404 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 RAVER1Q8IY67 606 aaKnown RBP13.33□□□□□ -0.28
HERC6-202ENST00000273960 XXYLT1Q8NBI6 393 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 FAM156AQ8NDB6 213 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 DCAKDQ8WVC6 231 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 SLCO2A1Q92959 643 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 PGBD4Q96DM1 585 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 PIH1D1Q9NWS0 290 aaKnown RBP13.33□□□□□ -0.28
HERC6-202ENST00000273960 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 SLC24A2Q9UI40 661 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 GOLGA8QA0A0J9YX86 632 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 GOLGA8OA6NCC3 632 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 GOLGA8NF8WBI6 632 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 PDLIM1O00151 329 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 DCXO43602 365 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 FKBP6O75344 327 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 CSPG5O95196 566 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 CRTAMO95727 393 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 DSG3P32926 999 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 ETFBP38117 255 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 CD300CQ08708 224 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 BMT2Q1RMZ1 405 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 CLEC16AQ2KHT3 1053 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 EFHC2Q5JST6 749 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 PDIK1LQ8N165 341 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 ZNF398Q8TD17 642 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 OLFML3Q9NRN5 406 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 POMPQ9Y244 141 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 TSC22D4Q9Y3Q8 395 aa13.33□□□□□ -0.28
HERC6-202ENST00000273960 IRS2Q9Y4H2 1338 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 LSM1O15116 133 aaKnown RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 ITM2AO43736 263 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 TMEM63AO94886 807 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 KPNA1P52294 538 aaPredicted RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 MTTPP55157 894 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 KLF1Q13351 362 aaPredicted RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 HSP90AA5PQ58FG0 334 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 C1orf220Q5T0J3 134 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 RNASEH2BQ5TBB1 312 aaKnown RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 LPCAT2Q7L5N7 544 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 FASTKD5Q7L8L6 764 aaKnown RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 NDUFAF2Q8N183 169 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 TTLL6Q8N841 843 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 WDR83Q9BRX9 315 aaKnown RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 FZD1Q9UP38 647 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 SNED1Q8TER0 1413 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 IQANK1A0A1B0GTG1 560 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 NEMP1O14524 444 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 SPTLC1O15269 473 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 TM9SF1O15321 606 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 ONECUT3O60422 494 aaPredicted RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 PROSCO94903 275 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 RBP3P10745 1247 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 COPAP53621 1224 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 TMEM270Q6UE05 265 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms