RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ANKRD22Q5VYY1 191 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 KLHDC9Q8NEP7 349 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 SNX25Q9H3E2 840 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 SGK1O00141 431 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 DPYSL4O14531 572 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 CYB561D2O14569 222 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 MDH1P40925 334 aaKnown RBP24.22■■□□□ 1.47
RAB40B-201ENST00000269347 SCNN1GP51170 649 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 SEC24CP53992 1094 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 BST2Q10589 180 aaKnown RBP24.22■■□□□ 1.47
RAB40B-201ENST00000269347 ACAP1Q15027 740 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 SV2CQ496J9 727 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 CCDC38Q502W7 563 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 CTU1Q7Z7A3 348 aaKnown RBP24.22■■□□□ 1.47
RAB40B-201ENST00000269347 B3GALNT2Q8NCR0 500 aa24.22■■□□□ 1.47
RAB40B-201ENST00000269347 SNRNP25Q9BV90 132 aaKnown RBP24.22■■□□□ 1.47
RAB40B-201ENST00000269347 TSPYL2Q9H2G4 693 aaPredicted RBP24.22■■□□□ 1.47
RAB40B-201ENST00000269347 TRMT13Q9NUP7 481 aaKnown RBP24.22■■□□□ 1.47
RAB40B-201ENST00000269347 TCRBV7S3A2A0A539 114 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 TTC4O95801 387 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 GHRP10912 638 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 LSP1P33241 339 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 THPOP40225 353 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 NDUFV1P49821 464 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 MTM1Q13496 603 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 PQLC3Q8N755 202 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 FAM129AQ9BZQ8 928 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 EFR3BQ9Y2G0 817 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 CASP8AP2Q9UKL3 1982 aa24.21■■□□□ 1.47
RAB40B-201ENST00000269347 DCAF8L1A6NGE4 600 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 ARL5CA6NH57 179 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 HUS1O60921 280 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 SETSIPP0DME0 302 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 CREB1P16220 341 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 WARSP23381 471 aaKnown RBP24.2■■□□□ 1.47
RAB40B-201ENST00000269347 NKX3-2P78367 333 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 TNFAIP8L3Q5GJ75 292 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 RNASEH2BQ5TBB1 312 aaKnown RBP24.2■■□□□ 1.47
RAB40B-201ENST00000269347 TRMT10CQ7L0Y3 403 aaKnown RBP24.2■■□□□ 1.47
RAB40B-201ENST00000269347 STK32AQ8WU08 396 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 CRTAC1Q9NQ79 661 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 PADI3Q9ULW8 664 aa24.2■■□□□ 1.47
RAB40B-201ENST00000269347 CASTOR2A6NHX0 329 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 I3L4J1 428 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 KIF3CO14782 793 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 KPNA6O60684 536 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 CACNA2D1P54289 1103 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 BCAT1P54687 386 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 PPP2R2AP63151 447 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 PIGZQ86VD9 579 aa24.2■■□□□ 1.46
RAB40B-201ENST00000269347 GOLGA8MH3BSY2 632 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 GABRDO14764 452 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 PNPLA4P41247 253 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 SENP8Q96LD8 212 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 PCDH18Q9HCL0 1135 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 TMPRSS4Q9NRS4 437 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 M0QZ92 97 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 PRPSAP2O60256 369 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 SDC4P31431 198 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 RPL22P35268 128 aaKnown RBP24.19■■□□□ 1.46
RAB40B-201ENST00000269347 ADCY1Q08828 1119 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 PTGISQ16647 500 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 OTUD1Q5VV17 481 aaPredicted RBP24.19■■□□□ 1.46
RAB40B-201ENST00000269347 ZC3H18Q86VM9 953 aaKnown RBP24.19■■□□□ 1.46
RAB40B-201ENST00000269347 CYP4X1Q8N118 509 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 ZCCHC9Q8N567 271 aaKnown RBP24.19■■□□□ 1.46
RAB40B-201ENST00000269347 TOP6BLQ8N6T0 577 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 PLD5Q8N7P1 536 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 PGM2Q96G03 612 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 RBM15Q96T37 977 aaKnown RBP eCLIP24.19■■□□□ 1.46
RAB40B-201ENST00000269347 WDR83Q9BRX9 315 aaKnown RBP24.19■■□□□ 1.46
RAB40B-201ENST00000269347 TMEM109Q9BVC6 243 aa24.19■■□□□ 1.46
RAB40B-201ENST00000269347 TDRD15B5MCY1 1934 aaKnown RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 F8W810 466 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 APOC4-APOC2K7ER74 178 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 XPOTO43592 962 aaKnown RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 APOC2P02655 101 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 PAN2Q504Q3 1202 aaKnown RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 C1orf228Q6PIY5 440 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 CCDC33Q8N5R6 958 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 CCDC185Q8N715 623 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 FAM71DQ8N9W8 422 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 PCDH19Q8TAB3 1148 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 PCDH9Q9HC56 1237 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 TPX2Q9ULW0 747 aaKnown RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 FARP1Q9Y4F1 1045 aaPredicted RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 PTPN1P18031 435 aaKnown RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 EIF3EP60228 445 aaKnown RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 LPIN1Q14693 890 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 MSS51Q4VC12 460 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 MDH1BQ5I0G3 518 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 SLC26A9Q7LBE3 791 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 BCAS4Q8TDM0 211 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 CPT1BQ92523 772 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 PRCCQ92733 491 aaPredicted RBP24.18■■□□□ 1.46
RAB40B-201ENST00000269347 RNF157Q96PX1 679 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 RHOBTB2Q9BYZ6 727 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 MTMR10Q9NXD2 777 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 MFHAS1Q9Y4C4 1052 aa24.18■■□□□ 1.46
RAB40B-201ENST00000269347 TSC2P49815 1807 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms