RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 NEMP1O14524 444 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 LGALS2P05162 132 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 APOA4P06727 396 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 GEMP55040 296 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 MAP3K7CLP57077 242 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 SKOR1P84550 965 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 ARID3BQ8IVW6 561 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-201ENST00000264555 TRIM54Q9BYV2 358 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 CHST7Q9NS84 486 aa17.34■□□□□ 0.37
PHRF1-201ENST00000264555 PDHA1P08559 390 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 CNTFP26441 200 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 RPAINQ86UA6 219 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 MREGQ8N565 214 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 ATP6V0D2Q8N8Y2 350 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 APBB2Q92870 758 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 CDCA5Q96FF9 252 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 LRRC40Q9H9A6 602 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 DNPEPQ9ULA0 475 aa17.33■□□□□ 0.37
PHRF1-201ENST00000264555 PRG3Q9Y2Y8 225 aaPredicted RBP17.33■□□□□ 0.37
PHRF1-201ENST00000264555 TOMM70O94826 608 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 RBBP7Q16576 425 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 C10orf120Q5SQS8 335 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.36
PHRF1-201ENST00000264555 CHSY1Q86X52 802 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 TRIML2Q8N7C3 387 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 TNFSF13BQ9Y275 285 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 TM9SF1O15321 606 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 NDUFS3O75489 264 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 MFSD14AQ96MC6 490 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 KDM4CQ9H3R0 1056 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 NINJ2Q9NZG7 142 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 TBCCQ15814 346 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 ZACNQ401N2 412 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 USP50Q70EL3 339 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-201ENST00000264555 SH3BP5LQ7L8J4 393 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 PLPPR4Q7Z2D5 763 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 DNAJB3Q8WWF6 145 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 PPP1R36Q96LQ0 422 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 SPATS2LQ9NUQ6 558 aaKnown RBP17.33■□□□□ 0.36
PHRF1-201ENST00000264555 FAM8A1Q9UBU6 413 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 LSM7Q9UK45 103 aaKnown RBP17.33■□□□□ 0.36
PHRF1-201ENST00000264555 MROH7Q68CQ1 1323 aa17.33■□□□□ 0.36
PHRF1-201ENST00000264555 PECAM1P16284 738 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-201ENST00000264555 LRRC38Q5VT99 294 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 ICA1LQ8NDH6 482 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 KCNK16Q96T55 309 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 E2F8A0AVK6 867 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 NCAM2O15394 837 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 LCA5LO95447 670 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 HOXC6P09630 235 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 TKTL1P51854 596 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 FAF1Q9UNN5 650 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-201ENST00000264555 F8VP50 259 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 EEF1B2P24534 225 aaKnown RBP17.32■□□□□ 0.36
PHRF1-201ENST00000264555 HARS2P49590 506 aaKnown RBP17.32■□□□□ 0.36
PHRF1-201ENST00000264555 OVGP1Q12889 678 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 CAPSQ13938 189 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 RABGAP1LQ5R372 815 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 IQSEC1Q6DN90 963 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 INPP4AQ96PE3 977 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-201ENST00000264555 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-201ENST00000264555 PCDHB7Q9Y5E2 793 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 POLE2P56282 527 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 HGSNATQ68CP4 663 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 NLRP9Q7RTR0 991 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 NCLNQ969V3 563 aa17.32■□□□□ 0.36
PHRF1-201ENST00000264555 ZBBXA8MT70 800 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 IRF6O14896 467 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 CYBBP04839 570 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 MIPP30301 263 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 RARS2Q5T160 578 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 AADACL2Q6P093 401 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 PRPF39Q86UA1 669 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 CDYLQ9Y232 598 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 TIMM44O43615 452 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 GJB6O95452 261 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 SCTRP47872 440 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 SLC6A3Q01959 620 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 ACVR2BQ13705 512 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 COLEC11Q9BWP8 271 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 SYF2O95926 243 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 AKAP5P24588 427 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 YY1P25490 414 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 MFSD10Q14728 455 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 ZCWPW2Q504Y3 356 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 TIGD7Q6NT04 549 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 ZCCHC9Q8N567 271 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 ACO2Q99798 780 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 FAM167BQ9BTA0 163 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 THTPAQ9BU02 230 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 MRPL1Q9BYD6 325 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 DDX43Q9NXZ2 648 aaKnown RBP17.31■□□□□ 0.36
PHRF1-201ENST00000264555 SIGLEC16A6NMB1 481 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 APOC4-APOC2K7ER74 178 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 PMPCBO75439 489 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 APOC2P02655 101 aa17.31■□□□□ 0.36
PHRF1-201ENST00000264555 ADCYAP1R1P41586 468 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms