RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 CCDC33Q8N5R6 958 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 PPP1R14CQ8TAE6 165 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 ACTRT2Q8TDY3 377 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 ZNF606Q8WXB4 792 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 PYDC1Q8WXC3 89 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 CMTM5Q96DZ9 223 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 C3orf70A6NLC5 250 aaPredicted RBP12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 WDR64B1ANS9 1081 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 TXNDC9O14530 226 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 CHADO15335 359 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 ZNF862O60290 1169 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 SERPINB2P05120 415 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 BPGMP07738 259 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 SERPINB6P35237 376 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 MAGEA8P43361 318 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 HSD17B4P51659 736 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 GDF10P55107 478 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 USP46P62068 366 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 DYNLT1P63172 113 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 PDE1BQ01064 536 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 CYLC2Q14093 348 aaPredicted RBP12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 TAZQ16635 292 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 UGT2A3Q6UWM9 527 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 MARVELD2Q8N4S9 558 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 PPM1NQ8N819 430 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 NMD3Q96D46 503 aaKnown RBP12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 ETNK2Q9NVF9 386 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 UBIAD1Q9Y5Z9 338 aa12.88□□□□□ -0.35
CHMP2B-201ENST00000263780 TCRBV7S3A2A0A539 114 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 TCRBV5S1A1TA0A578 114 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 APOC4-APOC2K7ER74 178 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 DENRO43583 198 aaKnown RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 DKC1O60832 514 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 STAM2O75886 525 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 CLPTM1O96005 669 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 APOC2P02655 101 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 C6orf222P0C671 652 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 KITP10721 976 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 POLR2BP30876 1174 aaKnown RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 CRHR1P34998 444 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 SERPINB9P50453 376 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 RBM5P52756 815 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 AQP4P55087 323 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 FOLH1Q04609 750 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 MSLNQ13421 630 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 TRIP10Q15642 601 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 ADRM1Q16186 407 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 TBC1D10BQ4KMP7 808 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 STXBP5Q5T5C0 1151 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 ACBD5Q5T8D3 534 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 PGM2L1Q6PCE3 622 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 LDHDQ86WU2 507 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 CATSPER1Q8NEC5 780 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 RDM1Q8NG50 284 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 DDI1Q8WTU0 396 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 KIFC3Q9BVG8 833 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 IMPG2Q9BZV3 1241 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 SMYD3Q9H7B4 428 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 CLIC5Q9NZA1 410 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 C6orf203Q9P0P8 240 aaPredicted RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 SLC9A2Q9UBY0 812 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 KDELR1P24390 212 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 ACAT1P24752 427 aaKnown RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 LIG4P49917 911 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 CACNB3P54284 484 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 KRT76Q01546 638 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 BTKQ06187 659 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 MTMR1Q13613 665 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 LRRC36Q1X8D7 754 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 LPCAT4Q643R3 524 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 POTEAQ6S8J7 498 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 NCAPG2Q86XI2 1143 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 UNC45BQ8IWX7 931 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 FAM71DQ8N9W8 422 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 MCPH1Q8NEM0 835 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 MRPS26Q9BYN8 205 aaKnown RBP12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 ADAMTS6Q9UKP5 1117 aa12.87□□□□□ -0.35
CHMP2B-201ENST00000263780 C15orf38-AP3S2A0A0A6YYH1 394 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 ENTPD3O75355 529 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 LDHAP00338 332 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 PRKCHP24723 683 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 PSMA2P25787 234 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 GRIA2P42262 883 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SFSWAPQ12872 951 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 DLG1Q12959 904 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 CCNIQ14094 377 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 UBAP2LQ14157 1087 aaKnown RBP12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 TXNRD3NBQ6F5E7 133 aa12.86□□□□□ -0.35
CHMP2B-201ENST00000263780 SPOPLQ6IQ16 392 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms