RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 DEPDC1BQ8WUY9 529 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 ING5Q8WYH8 240 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 ELSPBP1Q96BH3 223 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 SMOQ99835 787 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 XPO4Q9C0E2 1151 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 CRISPLD1Q9H336 500 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 SIX2Q9NPC8 291 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 OBP2AQ9NY56 170 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 SLC12A6Q9UHW9 1150 aa13.21□□□□□ -0.29
CLNS1A-201ENST00000263309 NCANO14594 1321 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ITIH6Q6UXX5 1313 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 LOC730098B7Z3J9 87 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 RNF225M0QZC1 329 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ZNF263O14978 683 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 TEX33O43247 280 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ECI2O75521 394 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 VNN2O95498 520 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 F11P03951 625 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 MBL2P11226 248 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 NSFP46459 744 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 GPR15P49685 360 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 TUBP50607 506 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 KIF11P52732 1056 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ZNF132P52740 706 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 NTHL1P78549 312 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 COG7P83436 770 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 CDR2Q01850 454 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ZP2Q05996 745 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 KLHL30Q0D2K2 578 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 TDGQ13569 410 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 PREPLQ4J6C6 727 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 PRSS36Q5K4E3 855 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 C1orf228Q6PIY5 440 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 PAQR9Q6ZVX9 377 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 CCDC186Q7Z3E2 898 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 CNGA4Q8IV77 575 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 TTC16Q8NEE8 873 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ITFG1Q8TB96 612 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 SYN2Q92777 582 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 IRF7Q92985 503 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 SHDQ96IW2 340 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 TRMT61BQ9BVS5 477 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 NAA15Q9BXJ9 866 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 DEF6Q9H4E7 631 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 CLIC5Q9NZA1 410 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 WDR35Q9P2L0 1181 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 DNMT3LQ9UJW3 386 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 FBXL21Q9UKT6 434 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 SORCS3Q9UPU3 1222 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 SCN1AP35498 2009 aa13.2□□□□□ -0.3
CLNS1A-201ENST00000263309 ZNF840PA6NDX5 716 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 C2CD4DB7Z1M9 353 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 HMGA1P17096 107 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 PSMC3P17980 439 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 CLCN1P35523 988 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 YWHAGP61981 247 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 SARM1Q6SZW1 724 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 SND1Q7KZF4 910 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 NPAS3Q8IXF0 933 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 SCML4Q8N228 414 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 KIAA1958Q8N8K9 716 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 C1orf131Q8NDD1 294 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 OR8K1Q8NGG5 319 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 SHKBP1Q8TBC3 707 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 SLC35F5Q8WV83 523 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 FAM149B1Q96BN6 582 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 FAM122AQ96E09 287 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 TRIM11Q96F44 468 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 C1QTNF1Q9BXJ1 281 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 GANQ9H2C0 597 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 LUC7LQ9NQ29 371 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 TBC1D14Q9P2M4 693 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 CAPN11Q9UMQ6 739 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 MYO9BQ13459 2157 aa13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 PRRC2BQ5JSZ5 2229 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-201ENST00000263309 STK25O00506 426 aa13.18□□□□□ -0.3
CLNS1A-201ENST00000263309 BEST1O76090 585 aa13.18□□□□□ -0.3
CLNS1A-201ENST00000263309 IPO7O95373 1038 aaKnown RBP13.18□□□□□ -0.3
CLNS1A-201ENST00000263309 CALB1P05937 261 aa13.18□□□□□ -0.3
CLNS1A-201ENST00000263309 GLI1P08151 1106 aa13.18□□□□□ -0.3
CLNS1A-201ENST00000263309 RARGP13631 454 aa13.18□□□□□ -0.3
CLNS1A-201ENST00000263309 CEBPBP17676 345 aa13.18□□□□□ -0.3
CLNS1A-201ENST00000263309 DEKP35659 375 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms