RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CCDC149Q6ZUS6 474 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 VN1R5Q7Z5H4 357 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 PODNQ7Z5L7 613 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 PARP8Q8N3A8 854 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 AGAP11Q8TF27 550 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 COPS7BQ9H9Q2 264 aaPredicted RBP12.46□□□□□ -0.42
SMG6-201ENST00000263073 A0A087X0B3 334 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 GUCA1CO95843 209 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 NR3C2P08235 984 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 SETD3Q86TU7 594 aaPredicted RBP12.45□□□□□ -0.42
SMG6-201ENST00000263073 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 UXS1Q8NBZ7 420 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 TBC1D16Q8TBP0 767 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 FIG4Q92562 907 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 DDX50Q9BQ39 737 aaKnown RBP12.45□□□□□ -0.42
SMG6-201ENST00000263073 CNGB3Q9NQW8 809 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 RIC8BQ9NVN3 520 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 SOX13Q9UN79 622 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 CLTCL1P53675 1640 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 ITGA9Q13797 1035 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 NFIXQ14938 502 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 MGAT5BQ3V5L5 792 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 N4BP2L1Q5TBK1 243 aaPredicted RBP12.45□□□□□ -0.42
SMG6-201ENST00000263073 TSHZ1Q6ZSZ6 1077 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 LRRC8DQ7L1W4 858 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 CPB2Q96IY4 423 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 PPCSQ9HAB8 311 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 UTP6Q9NYH9 597 aaKnown RBP12.45□□□□□ -0.42
SMG6-201ENST00000263073 NCOA3Q9Y6Q9 1424 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 DNALI1O14645 258 aaPredicted RBP12.45□□□□□ -0.42
SMG6-201ENST00000263073 RASSF9O75901 435 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 SERPINB8P50452 374 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 FAM117BQ6P1L5 589 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 FAM172AQ8WUF8 416 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
SMG6-201ENST00000263073 ZNF333Q96JL9 665 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 KCTD14Q9BQ13 255 aaPredicted RBP12.45□□□□□ -0.42
SMG6-201ENST00000263073 VPS33BQ9H267 617 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 PTGES3LE9PB15 166 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 GSNP06396 782 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 ABCG1P45844 678 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 PSMC6P62333 389 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 GIT2Q14161 759 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 TAF5Q15542 800 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 TATDN2Q93075 761 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 CHKBQ9Y259 395 aa12.45□□□□□ -0.42
SMG6-201ENST00000263073 ERI2A8K979 691 aaKnown RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 PIK3CDO00329 1044 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ETS2P15036 469 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 RPA3P35244 121 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 ALFQ53S48 1182 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 RBM43Q6ZSC3 357 aaKnown RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 AENQ8WTP8 325 aaKnown RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 FOXP3Q9BZS1 431 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 GTF2A1LQ9UNN4 478 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 WDR27A2RRH5 827 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 DYNC1LI2O43237 492 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 EFCAB14O75071 495 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ZSCAN5DPP0CG00 497 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 GLI2P10070 1586 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ETS1P14921 441 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 CPA3P15088 417 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ATP4AP20648 1035 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 PRIM2P49643 509 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 PSMD7P51665 324 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 KCNJ2P63252 427 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 CHRNB3Q05901 458 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 CDKAL1Q5VV42 579 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 RSBN1Q5VWQ0 802 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 PTAR1Q7Z6K3 402 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 ARHGEF19Q8IW93 802 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 KIAA0895Q8NCT3 520 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 TAS1R2Q8TE23 839 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 DDIT4Q9NX09 232 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 MAP3K4Q9Y6R4 1608 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 PSMD3O43242 534 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 KATNA1O75449 491 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 PPIDQ08752 370 aaKnown RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 FUKQ8N0W3 1084 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 SCFD2Q8WU76 684 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 RBBP8Q99708 897 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 SYTL2Q9HCH5 934 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 FBXO28Q9NVF7 368 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 NINJ2Q9NZG7 142 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 C2CD2Q9Y426 696 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 COPG1Q9Y678 874 aaKnown RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 TADA2AO75478 443 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ARP10275 920 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 ITGB6P18564 788 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 PBLDP30039 288 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
SMG6-201ENST00000263073 RAB14P61106 215 aa12.44□□□□□ -0.42
SMG6-201ENST00000263073 RPS7P62081 194 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms