RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 DAOAP59103 153 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 COPS2P61201 443 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 SMARCB1Q12824 385 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 C15orf59Q2T9L4 293 aaPredicted RBP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 ODF2Q5BJF6 829 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 RTP2Q5QGT7 225 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 ZFYVE27Q5T4F4 411 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 VSTM1Q6UX27 236 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 TMCO2Q7Z6W1 182 aaPredicted RBP13.63□□□□□ -0.23
VAMP7-201ENST00000262640 CCDC50Q8IVM0 306 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 IRGQQ8WZA9 623 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 ANKRD7Q92527 254 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 BADQ92934 168 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 FAM149B1Q96BN6 582 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 MTUS1Q9ULD2 1270 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
VAMP7-201ENST00000262640 FSCN2O14926 492 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 ZBED1O96006 694 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 MATKP42679 507 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 MAGEA11P43364 429 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 C8orf74Q6P047 294 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 RNF168Q8IYW5 571 aaPredicted RBP13.62□□□□□ -0.23
VAMP7-201ENST00000262640 FAM172AQ8WUF8 416 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 YME1L1Q96TA2 773 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 KRT12Q99456 494 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 C11orf84Q9BUA3 381 aaPredicted RBP13.62□□□□□ -0.23
VAMP7-201ENST00000262640 ABI2Q9NYB9 513 aaPredicted RBP13.62□□□□□ -0.23
VAMP7-201ENST00000262640 ZBBXA8MT70 800 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 PRPSAP2O60256 369 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 TRUB2O95900 331 aaKnown RBP13.62□□□□□ -0.23
VAMP7-201ENST00000262640 CYP2F1P24903 491 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 IL1R2P27930 398 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 GRIK1P39086 918 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 RABGGTBP53611 331 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 ATP11AP98196 1134 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 CDO1Q16878 200 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 ATP13A4Q4VNC1 1196 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 TXNRD3NBQ6F5E7 133 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 ZNF365Q70YC5 407 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 TAS1R1Q7RTX1 841 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 SLC39A11Q8N1S5 342 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 CENPIQ92674 756 aaPredicted RBP13.62□□□□□ -0.23
VAMP7-201ENST00000262640 SLC2A13Q96QE2 648 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 EPC1Q9H2F5 836 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 ZWILCHQ9H900 591 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 POPDC2Q9HBU9 364 aa13.62□□□□□ -0.23
VAMP7-201ENST00000262640 NGRNQ9NPE2 291 aaKnown RBP13.62□□□□□ -0.23
VAMP7-201ENST00000262640 MRPL42Q9Y6G3 142 aaKnown RBP13.62□□□□□ -0.23
VAMP7-201ENST00000262640 VWA8A3KMH1 1905 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 TRIM66O15016 1216 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 CPB1P15086 417 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 NOS2P35228 1153 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 PTPN7P35236 360 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 GPR17Q13304 367 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 SH3PXD2AQ5TCZ1 1133 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 PM20D1Q6GTS8 502 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 PSRC1Q6PGN9 363 aaPredicted RBP13.61□□□□□ -0.23
VAMP7-201ENST00000262640 ADAT2Q7Z6V5 191 aaKnown RBP13.61□□□□□ -0.23
VAMP7-201ENST00000262640 KLHL7Q8IXQ5 586 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 C7orf61Q8IZ16 206 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 DEFB106AQ8N104 65 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 COLGALT1Q8NBJ5 622 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 C2orf15Q8WU43 125 aaKnown RBP13.61□□□□□ -0.23
VAMP7-201ENST00000262640 NDRG1Q92597 394 aaKnown RBP13.61□□□□□ -0.23
VAMP7-201ENST00000262640 RUBCNQ92622 972 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 C8orf48Q96LL4 319 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 SLITRK1Q96PX8 696 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 LRRC1Q9BTT6 524 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 PARD6BQ9BYG5 372 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 OSBPL8Q9BZF1 889 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 PCSK1NQ9UHG2 260 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 USP17L7P0C7H9 530 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 RALAP11233 206 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 SLC25A52Q3SY17 297 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 STRADAQ7RTN6 431 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 SPPL2BQ8TCT7 592 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 PIK3R5Q8WYR1 880 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
VAMP7-201ENST00000262640 TMEM169Q96HH4 297 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 TBCBQ99426 244 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 TRIM62Q9BVG3 475 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 CHST7Q9NS84 486 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 KLHL11Q9NVR0 708 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 SPG21Q9NZD8 308 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 MTRRQ9UBK8 725 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 BACE2Q9Y5Z0 518 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 USP3Q9Y6I4 520 aa13.61□□□□□ -0.23
VAMP7-201ENST00000262640 LRRD1A4D1F6 860 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 SOD2P04179 222 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 MCM3P25205 808 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 ARPP19P56211 112 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 BOLA3Q53S33 107 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 SPOCD1Q6ZMY3 1216 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms